Gm5051 Pseudogene Detail

Summary

• Symbol
  Gm5051
• Name
  predicted gene 5051

• Feature Type
  pseudogene
• IDs
  MGI:3647306
  NCBI Gene: 269810
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:140365897-140366381 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 70.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647306	pseudogene	Chr6:140365865-140366392 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013759	pseudogene	Chr6:145136174-145136658 (+)
A/J	MGP_AJ_G0013754	pseudogene	Chr6:139363380-139363864 (+)
AKR/J	MGP_AKRJ_G0013709	pseudogene	Chr6:143543778-143546241 (+)
BALB/cJ	MGP_BALBcJ_G0013735	pseudogene	Chr6:139215220-139215704 (+)
C3H/HeJ	MGP_C3HHeJ_G0013565	pseudogene	Chr6:143624661-143625145 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0009977	pseudogene	Chr14:78462836-78463321 (-)
CAST/EiJ	MGP_CASTEiJ_G0013249	pseudogene	Chr6:143172428-143172913 (+)
CBA/J	MGP_CBAJ_G0013542	pseudogene	Chr6:154741087-154744646 (+)
DBA/2J	MGP_DBA2J_G0013622	pseudogene	Chr6:138231663-138232147 (+)
FVB/NJ	MGP_FVBNJ_G0013616	pseudogene	Chr6:137019303-137019788 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013633	pseudogene	Chr6:158654138-158656526 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014111	pseudogene	Chr6:143376281-143377786 (+)
PWK/PhJ	MGP_PWKPhJ_G0013061	pseudogene	Chr6:136726646-136727815 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012839	pseudogene	Chr6:141613388-141613877 (+)
WSB/EiJ	MGP_WSBEiJ_G0013310	pseudogene	Chr6:144032093-144032578 (+)

Homology

• Gene Tree
  Gm5051
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107891 (Evidence)
• NCBI Gene
  269810

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107891	Ensembl Gene Model | MGI Sequence Detail	485	C57BL/6J
transcript	ENSMUST00000204085	Ensembl | MGI Sequence Detail	485	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;