Gm8572 Pseudogene Detail

Summary

• Symbol
  Gm8572
• Name
  predicted gene 8572

• Feature Type
  pseudogene
• IDs
  MGI:3647293
  NCBI Gene: 667317
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:53085621-53086173 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 28.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647293	pseudogene	Chr18:53085522-53086307 (+)
129S1/SvImJ	ENSMUSG00200030580	pseudogene	Chr18:50118599-50119151 (+)
A/J	ENSMUSG00195025814	pseudogene	Chr18:50285233-50285785 (+)
AKR/J	ENSMUSG00220021340	pseudogene	Chr18:50230230-50230782 (+)
BALB/cJ	ENSMUSG00180007858	pseudogene	Chr18:50845404-50845956 (+)
C3H/HeJ	ENSMUSG00175011327	pseudogene	Chr18:50454419-50454971 (+)
C57BL/6NJ	ENSMUSG00215009098	pseudogene	Chr18:49807300-49807852 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013822	pseudogene	Chr18:49676242-49676797 (+)
CBA/J	ENSMUSG00210022679	pseudogene	Chr18:50388115-50388667 (+)
DBA/2J	ENSMUSG00185028282	pseudogene	Chr18:50308127-50308679 (+)
FVB/NJ	ENSMUSG00205015738	pseudogene	Chr18:49747377-49747929 (+)
JF1/MsJ	ENSUMUG00000029770	pseudogene	Chr18:50219543-50220095 (+)
LP/J	ENSMUSG00230012533	pseudogene	Chr18:52297866-52298418 (+)
NOD/ShiLtJ	ENSMUSG00190029211	pseudogene	Chr18:50005641-50006193 (+)
NZO/HlLtJ	ENSMUSG00225035770	pseudogene	Chr18:52211626-52212178 (+)
PWK/PhJ	ENSLUMG00010021990	pseudogene	Chr18:50380322-50380874 (+)
SPRET/EiJ	ENSMSPG00010013293	pseudogene	Chr18:50716204-50716758 (+)
WSB/EiJ	ENSIUOG00005009690	pseudogene	Chr18:49913955-49914507 (+)

Homology

• Gene Tree
  Gm8572
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm8572
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118195 (Evidence)
• NCBI Gene
  667317

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118195	Ensembl Gene Model | MGI Sequence Detail	553	C57BL/6J
transcript	ENSMUST00000235787	Ensembl | MGI Sequence Detail	553	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67