Cyp2a21-ps Pseudogene Detail

Summary

• Symbol
  Cyp2a21-ps
• Name
  cytochrome P450, family 2, subfamily a, polypeptide 21, pseudogene
• Synonyms
  EG330491

• Feature Type
  pseudogene
• IDs
  MGI:3647278
  NCBI Gene: 330491
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:26645383-26651977 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 15.67 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  278 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647278	pseudogene	Chr7:26616806-26651977 (+)
129S1/SvImJ	ENSMUSG00200047122	pseudogene	Chr7:16410313-16445244 (+)
A/J	ENSMUSG00195053574	pseudogene	Chr7:19060189-19095198 (+)
AKR/J	ENSMUSG00220053418	pseudogene	Chr7:25390776-25425783 (-)
BALB/cJ	ENSMUSG00180054099	pseudogene	Chr7:17125392-17160402 (+)
C3H/HeJ	ENSMUSG00175052991	pseudogene	Chr7:18174954-18209929 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052808	pseudogene	Chr7:18117254-18145539 (+)
CBA/J	ENSMUSG00210053393	pseudogene	Chr7:17360459-17395436 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205052425	pseudogene	Chr7:17149625-17184596 (+)
JF1/MsJ	ENSUMUG00000057392	pseudogene	Chr7:24901621-24930185 (+)
LP/J	ENSMUSG00230053842	pseudogene	Chr7:25636326-25671257 (+)
NOD/ShiLtJ	ENSMUSG00190052775	pseudogene	Chr7:16801268-16836255 (+)
NZO/HlLtJ	ENSMUSG00225027397	pseudogene	Chr7:24516511-24551494 (+)
PWK/PhJ	ENSLUMG00010052289	pseudogene	Chr7:16829099-16857438 (+)
SPRET/EiJ	ENSMSPG00010051380	pseudogene	Chr7:16331928-16332487 (-)
WSB/EiJ	ENSIUOG00005053622	pseudogene	Chr7:11056897-11091866 (+)

Homology

• Gene Tree
  Cyp2a21-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000108487 (Evidence)
• NCBI Gene
  330491

Representative Sequences			Length	Strain/Species
genomic	330491	NCBI Gene Model | MGI Sequence Detail	6595	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;