Gm6717 Pseudogene Detail

Summary

• Symbol
  Gm6717
• Name
  predicted gene 6717

• Feature Type
  pseudogene
• IDs
  MGI:3647267
  NCBI Gene: 626897
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:112065598-112066435 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 50.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647267	pseudogene	Chr1:112065596-112066447 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220000228	pseudogene	Chr1:108844534-108845374 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215007172	pseudogene	Chr1:109061425-109062262 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002909	pseudogene	Chr1:108259300-108260138 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185013671	pseudogene	Chr1:113380459-113381299 (+)
FVB/NJ	ENSMUSG00205008668	pseudogene	Chr1:108296667-108297507 (+)
JF1/MsJ	ENSUMUG00000028125	pseudogene	Chr1:112033616-112034454 (+)
LP/J	ENSMUSG00230009197	pseudogene	Chr1:112620431-112620696 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225002984	pseudogene	Chr1:116539254-116540094 (+)
PWK/PhJ	ENSLUMG00010000252	pseudogene	Chr1:108314456-108315294 (+)
SPRET/EiJ	ENSMSPG00010000534	pseudogene	Chr1:110577990-110578828 (+)
WSB/EiJ	ENSIUOG00005001108	pseudogene	Chr1:108684720-108685557 (+)

Homology

• Gene Tree
  Gm6717
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm6717
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000101220 (Evidence)
• NCBI Gene
  626897

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101220	Ensembl Gene Model | MGI Sequence Detail	838	C57BL/6J
transcript	ENSMUST00000185549	Ensembl | MGI Sequence Detail	838	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45