Gm7043 Pseudogene Detail

Summary

• Symbol
  Gm7043
• Name
  predicted gene 7043

• Feature Type
  pseudogene
• IDs
  MGI:3647242
  NCBI Gene: 630810
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:3512079-3512607 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 1.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647242	pseudogene	Chr17:3512075-3512607 (-)
129S1/SvImJ	ENSMUSG00200034795	pseudogene	Chr17:393253-393784 (-)
A/J	ENSMUSG00195024000	pseudogene	Chr17:388501-389033 (-)
AKR/J	ENSMUSG00220028327	pseudogene	Chr17:573639-574170 (-)
BALB/cJ	ENSMUSG00180027030	pseudogene	Chr17:400397-400929 (-)
C3H/HeJ	ENSMUSG00175035815	pseudogene	Chr17:360516-361048 (-)
C57BL/6NJ	ENSMUSG00215028540	pseudogene	Chr17:392998-393530 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022882	pseudogene	Chr17:433209-433740 (-)
CBA/J	ENSMUSG00210040840	pseudogene	Chr17:377575-378107 (-)
DBA/2J	ENSMUSG00185023557	pseudogene	Chr17:484948-485479 (-)
FVB/NJ	ENSMUSG00205009695	pseudogene	Chr17:430052-430583 (-)
JF1/MsJ	ENSUMUG00000041861	pseudogene	Chr17:460259-460790 (-)
LP/J	ENSMUSG00230035003	pseudogene	Chr17:1589683-1590215 (-)
NOD/ShiLtJ	ENSMUSG00190039657	pseudogene	Chr17:361049-361580 (-)
NZO/HlLtJ	ENSMUSG00225029112	pseudogene	Chr17:3880585-3881117 (-)
PWK/PhJ	ENSLUMG00010019810	pseudogene	Chr17:493040-493572 (-)
SPRET/EiJ	ENSMSPG00010040530	pseudogene	Chr17:365251-365783 (-)
WSB/EiJ	ENSIUOG00005014973	pseudogene	Chr17:422266-422798 (-)

Homology

• Gene Tree
  Gm7043
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115039 (Evidence)
• NCBI Gene
  630810

Representative Sequences			Length	Strain/Species
genomic	630810	NCBI Gene Model | MGI Sequence Detail	529	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7043:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr146287	Chr17:3512640-3512648 (-)	-37 bp