Gm9002 Pseudogene Detail

Summary

• Symbol
  Gm9002
• Name
  predicted gene 9002

• Feature Type
  pseudogene
• IDs
  MGI:3647170
  NCBI Gene: 668146
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:117265523-117266021 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 65.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647170	pseudogene	Chr10:117265523-117266021 (+)
129S1/SvImJ	ENSMUSG00200026470	pseudogene	Chr10:113676108-113676606 (+)
A/J	ENSMUSG00195023442	pseudogene	Chr10:114108652-114109159 (+)
AKR/J	ENSMUSG00220015110	pseudogene	Chr10:113684299-113684797 (+)
BALB/cJ	ENSMUSG00180018797	pseudogene	Chr10:114125555-114126062 (+)
C3H/HeJ	ENSMUSG00175025959	pseudogene	Chr10:114072991-114073489 (+)
C57BL/6NJ	ENSMUSG00215023799	pseudogene	Chr10:113768901-113769399 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009451	pseudogene	Chr10:110191182-110191678 (+)
CAST/EiJ	ENSTCUG00005034432	pseudogene	Chr10:113076635-113077143 (+)
CBA/J	ENSMUSG00210021871	pseudogene	Chr10:113922572-113923070 (+)
DBA/2J	ENSMUSG00185009726	pseudogene	Chr10:114043415-114043922 (+)
FVB/NJ	ENSMUSG00205028759	pseudogene	Chr10:113371574-113372072 (+)
JF1/MsJ	ENSUMUG00000024948	pseudogene	Chr10:115331830-115332335 (+)
LP/J	ENSMUSG00230026840	pseudogene	Chr10:115995618-115996116 (+)
NOD/ShiLtJ	ENSMUSG00190019534	pseudogene	Chr10:114170064-114170571 (+)
NZO/HlLtJ	ENSMUSG00225018649	pseudogene	Chr10:120250548-120251046 (+)
PWK/PhJ	ENSLUMG00010014251	pseudogene	Chr10:113735690-113736195 (+)
SPRET/EiJ	ENSMSPG00010016161	pseudogene	Chr10:115676337-115676844 (+)
WSB/EiJ	ENSIUOG00005014778	pseudogene	Chr10:113762638-113763145 (+)

Homology

• Gene Tree
  Gm9002
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  2
• Genomic Mutations
  1 involving Gm9002
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000095826 (Evidence)
• NCBI Gene
  668146

Representative Sequences			Length	Strain/Species
genomic	668146	NCBI Gene Model | MGI Sequence Detail	499	C57BL/6J

References

• Summaries
  All 12

  Phenotypes 7
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14