Gm6682 Pseudogene Detail

Summary

• Symbol
  Gm6682
• Name
  predicted gene 6682

• Feature Type
  pseudogene
• IDs
  MGI:3647156
  NCBI Gene: 626534
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:4832170-4833515 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 2.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647156	pseudogene	Chr12:4832069-4833611 (+)
129S1/SvImJ	ENSMUSG00200024692	pseudogene	Chr12:1792172-1793517 (+)
A/J	ENSMUSG00195017348	pseudogene	Chr12:1819904-1821249 (+)
AKR/J	ENSMUSG00220030307	pseudogene	Chr12:1817453-1818798 (+)
BALB/cJ	ENSMUSG00180015164	pseudogene	Chr12:1816379-1817724 (+)
C3H/HeJ	ENSMUSG00175009609	pseudogene	Chr12:1803712-1805057 (+)
C57BL/6NJ	ENSMUSG00215025982	pseudogene	Chr12:1746980-1748325 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023327	pseudogene	Chr12:1635675-1637020 (+)
CBA/J	ENSMUSG00210013509	pseudogene	Chr12:1823426-1824771 (+)
DBA/2J	ENSMUSG00185021555	pseudogene	Chr12:1799133-1800478 (+)
FVB/NJ	ENSMUSG00205003833	pseudogene	Chr12:1596824-1598169 (+)
JF1/MsJ	ENSUMUG00000035152	pseudogene	Chr12:1800903-1802248 (+)
LP/J	ENSMUSG00230012217	pseudogene	Chr12:3627197-3628542 (+)
NOD/ShiLtJ	ENSMUSG00190008017	pseudogene	Chr12:3038869-3040214 (+)
NZO/HlLtJ	ENSMUSG00225019357	pseudogene	Chr12:5687279-5688624 (+)
PWK/PhJ	ENSLUMG00010017230	pseudogene	Chr12:1620550-1621895 (+)
SPRET/EiJ	ENSMSPG00010005215	pseudogene	Chr12:2037291-2038635 (+)
WSB/EiJ	ENSIUOG00005002437	pseudogene	Chr12:1803580-1804925 (+)

Homology

• Gene Tree
  Gm6682
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000091269 (Evidence)
• NCBI Gene
  626534

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091269	Ensembl Gene Model | MGI Sequence Detail	1346	C57BL/6J
transcript	ENSMUST00000169666	Ensembl | MGI Sequence Detail	1346	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6682:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr112585	Chr12:4832060-4832068 (+)	-106 bp
Tssr112586	Chr12:4832136-4832154 (+)	-25 bp