Gm5611 Pseudogene Detail

Summary

• Symbol
  Gm5611
• Name
  predicted gene 5611

• Feature Type
  pseudogene
• IDs
  MGI:3647121
  NCBI Gene: 434373
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:16941341-16942192 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 5.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647121	pseudogene	Chr9:16941262-16942492 (+)
129S1/SvImJ	ENSMUSG00200050325	pseudogene	Chr9:13825601-13826452 (+)
A/J	ENSMUSG00195040391	pseudogene	Chr9:13729164-13730015 (+)
AKR/J	ENSMUSG00220036818	pseudogene	Chr9:13702581-13703432 (+)
BALB/cJ	ENSMUSG00180044407	pseudogene	Chr9:13853452-13854303 (+)
C3H/HeJ	ENSMUSG00175045712	pseudogene	Chr9:13810969-13811820 (+)
C57BL/6NJ	ENSMUSG00215038592	pseudogene	Chr9:13794957-13795808 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036192	pseudogene	Chr9:13821233-13822093 (+)
CBA/J	ENSMUSG00210045511	pseudogene	Chr9:13831648-13832499 (+)
DBA/2J	ENSMUSG00185027041	pseudogene	Chr9:13922725-13923576 (+)
FVB/NJ	ENSMUSG00205043341	pseudogene	Chr9:13889141-13889992 (+)
JF1/MsJ	ENSUMUG00000002961	pseudogene	Chr1:50222802-50223677 (+)
JF1/MsJ	ENSUMUG00000047549	pseudogene	Chr9:13933792-13934664 (+)
LP/J	ENSMUSG00230044921	pseudogene	Chr9:14320339-14321190 (+)
NOD/ShiLtJ	ENSMUSG00190044688	pseudogene	Chr9:13828567-13829418 (+)
NZO/HlLtJ	ENSMUSG00225051830	pseudogene	Chr9:14216236-14217087 (+)
PWK/PhJ	ENSLUMG00010047251	pseudogene	Chr9:13875835-13876707 (+)
SPRET/EiJ	ENSMSPG00010025248	pseudogene	Chr9:14070652-14071500 (+)
WSB/EiJ	ENSIUOG00005046722	pseudogene	Chr9:13501318-13502169 (+)

Homology

• Gene Tree
  Gm5611
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000090602 (Evidence)
• NCBI Gene
  434373

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090602	Ensembl Gene Model | MGI Sequence Detail	852	C57BL/6J
transcript	ENSMUST00000164523	Ensembl | MGI Sequence Detail	852	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;