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Obox3-ps2 Pseudogene Detail
Summary
  • Symbol
    Obox3-ps2
  • Name
    oocyte specific homeobox 3, pseudogene 2
  • Synonyms
    Gm8040
Location &
Maps
more
  • Sequence Map
    Chr7:14534149-14535751 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 8.30 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647077
 pseudogene Chr7:14533719-14544775 (-)
129S1/SvImJ ENSMUSG00200043082
 pseudogene Chr7:8667669-8667865 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ ENSMUSG00180051170
 pseudogene Chr7:8201172-8202774 (-)
C3H/HeJ ENSMUSG00175051327
 pseudogene Chr7:9476461-9476878 (-)
C57BL/6NJ ENSMUSG00215045252
 pseudogene Chr7:8756921-8758532 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210048953
 pseudogene Chr7:8721316-8722927 (-)
DBA/2J ENSMUSG00185054653
 pseudogene Chr7:11449221-11450823 (-)
FVB/NJ no annotation
JF1/MsJ ENSUMUG00000048589
 pseudogene Chr7:14905109-14906716 (-)
JF1/MsJ ENSUMUG00000042172
 pseudogene Chr7:11293073-11294685 (-)
JF1/MsJ ENSUMUG00000046903
 pseudogene Chr7:11757563-11759170 (-)
JF1/MsJ ENSUMUG00000047377
 pseudogene Chr7:12683232-12684836 (-)
JF1/MsJ ENSUMUG00000048311
 pseudogene Chr7:14562069-14563675 (-)
JF1/MsJ ENSUMUG00000050432
 pseudogene Chr7:13519980-13521589 (-)
LP/J ENSMUSG00230047977
 pseudogene Chr7:15631543-15633145 (-)
NOD/ShiLtJ ENSMUSG00190052183
 pseudogene Chr7:12544525-12546118 (-)
NZO/HlLtJ ENSMUSG00225054375
 pseudogene Chr7:13092512-13094114 (-)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010049670
 pseudogene Chr7:8244493-8246052 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093584 Ensembl Gene Model | MGI Sequence Detail 1603 C57BL/6J ±  kb
transcript ENSMUST00000177243 Ensembl | MGI Sequence Detail 1004 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:340071 Ji S, et al., OBOX regulates mouse zygotic genome activation and early development. Nature. 2023 Aug;620(7976):1047-1053
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory