Gm6215 Pseudogene Detail

Summary

• Symbol
  Gm6215
• Name
  predicted pseudogene 6215

• Feature Type
  pseudogene
• IDs
  MGI:3647031
  NCBI Gene: 621352
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:134249770-134252769 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 56.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647031	pseudogene	ChrX:134249770-134252772 (+)
129S1/SvImJ	ENSMUSG00200048596	pseudogene	ChrX:113325043-113328029 (+)
A/J	ENSMUSG00195048650	pseudogene	ChrX:117164278-117167272 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180039664	pseudogene	ChrX:113569083-113572073 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215045739	pseudogene	ChrX:113952369-113955371 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040915	pseudogene	ChrX:114767630-114770685 (+)
CBA/J	ENSMUSG00210042896	pseudogene	ChrX:114489769-114492759 (+)
DBA/2J	ENSMUSG00185030735	pseudogene	ChrX:128302669-128305655 (+)
FVB/NJ	ENSMUSG00205035658	pseudogene	ChrX:112963379-112966373 (+)
JF1/MsJ	ENSUMUG00000031847	pseudogene	ChrX:147577545-147580565 (+)
JF1/MsJ	ENSUMUG00000031810	pseudogene	ChrX:147372882-147375910 (-)
LP/J	ENSMUSG00230040871	pseudogene	ChrX:134991186-134994172 (+)
NOD/ShiLtJ	ENSMUSG00190044064	pseudogene	ChrX:113802113-113805107 (+)
NZO/HlLtJ	ENSMUSG00225037375	pseudogene	ChrX:139729631-139732667 (+)
NZO/HlLtJ	ENSMUSG00225037314	pseudogene	ChrX:139488002-139491048 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010040660	pseudogene	ChrX:116740084-116743211 (-)
SPRET/EiJ	ENSMSPG00010040681	pseudogene	ChrX:116910006-116913078 (+)
WSB/EiJ	ENSIUOG00005040134	pseudogene	ChrX:114500120-114503161 (+)

Homology

• Gene Tree
  Gm6215
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm6215
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000095599 (Evidence)
• NCBI Gene
  621352

Representative Sequences			Length	Strain/Species
genomic	621352	NCBI Gene Model | MGI Sequence Detail	3000	C57BL/6J

References

• Summaries
  All 7

  Developmental Gene Expression 1

  Diseases 1

  Phenotypes 2
• Earliest
  J:199138 Zhou J, et al., A 1.1-Mb segmental deletion on the X chromosome causes meiotic failure in male mice. Biol Reprod. 2013 Jun;88(6):159
• Latest
  J:210663 Zhou J, et al., Respiratory failure, cleft palate and epilepsy in the mouse model of human Xq22.1 deletion syndrome. Hum Mol Genet. 2014 Jul 15;23(14):3823-9