Bod1-ps Pseudogene Detail

Summary

• Symbol
  Bod1-ps
• Name
  biorientation of chromosomes in cell division 1, pseudogene
• Synonyms
  Gm7843

• Feature Type
  pseudogene
• IDs
  MGI:3646992
  NCBI Gene: 102637743
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:17552033-17552550 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 10.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646992	pseudogene	Chr16:17552016-17553158 (+)
129S1/SvImJ	ENSMUSG00200047208	pseudogene	Chr16:14548590-14549108 (+)
A/J	ENSMUSG00195035006	pseudogene	Chr16:14105896-14106412 (+)
AKR/J	ENSMUSG00220045619	pseudogene	Chr16:14422154-14422672 (+)
BALB/cJ	ENSMUSG00180041529	pseudogene	Chr16:14347117-14347635 (+)
C3H/HeJ	ENSMUSG00175050718	pseudogene	Chr16:14492136-14492654 (+)
C57BL/6NJ	ENSMUSG00215043320	pseudogene	Chr16:14213237-14213755 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046270	pseudogene	Chr16:14431508-14431824 (+)
CBA/J	ENSMUSG00210048501	pseudogene	Chr16:14508436-14508954 (+)
DBA/2J	ENSMUSG00185035684	pseudogene	Chr16:14454605-14455123 (+)
FVB/NJ	ENSMUSG00205048547	pseudogene	Chr16:14462227-14462747 (+)
JF1/MsJ	ENSUMUG00000053872	pseudogene	Chr16:14537307-14537825 (+)
LP/J	ENSMUSG00230045726	pseudogene	Chr16:17032496-17033013 (+)
NOD/ShiLtJ	ENSMUSG00190050694	pseudogene	Chr16:14594493-14595010 (+)
NZO/HlLtJ	ENSMUSG00225032185	pseudogene	Chr16:20278297-20278815 (+)
PWK/PhJ	ENSLUMG00010049972	pseudogene	Chr16:14420001-14420516 (+)
SPRET/EiJ	ENSMSPG00010047675	pseudogene	Chr16:14437375-14437881 (+)
WSB/EiJ	ENSIUOG00005044557	pseudogene	Chr16:14588587-14589102 (+)

Homology

• Gene Tree
  Bod1-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116936 (Evidence)
• NCBI Gene
  102637743

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116936	Ensembl Gene Model | MGI Sequence Detail	518	C57BL/6J
transcript	ENSMUST00000231811	Ensembl | MGI Sequence Detail	518	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;