Gm5692 Pseudogene Detail

Summary

• Symbol
  Gm5692
• Name
  predicted gene 5692

• Feature Type
  pseudogene
• IDs
  MGI:3646968
  NCBI Gene: 435588
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:11381334-11382186 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 8.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646968	pseudogene	Chr19:11381312-11382368 (-)
129S1/SvImJ	ENSMUSG00200052671	pseudogene	Chr19:8061309-8062365 (-)
A/J	ENSMUSG00195053783	pseudogene	Chr19:8265662-8266718 (-)
AKR/J	ENSMUSG00220051421	pseudogene	Chr19:8176425-8177481 (-)
BALB/cJ	ENSMUSG00180051488	pseudogene	Chr19:8630251-8631307 (-)
C3H/HeJ	ENSMUSG00175015404	pseudogene	Chr19:7907010-7908066 (-)
C57BL/6NJ	ENSMUSG00215047336	pseudogene	Chr19:7978621-7979677 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010286	pseudogene	Chr19:8624112-8625234 (-)
CAST/EiJ	ENSTCUG00005043450	pseudogene	Chr19:7761150-7762266 (-)
CBA/J	ENSMUSG00210050478	pseudogene	Chr19:8105549-8106605 (-)
DBA/2J	ENSMUSG00185053908	pseudogene	Chr19:8515564-8516620 (-)
FVB/NJ	ENSMUSG00205052854	pseudogene	Chr19:7972988-7974050 (-)
JF1/MsJ	ENSUMUG00000056834	pseudogene	Chr19:8641753-8642866 (-)
LP/J	ENSMUSG00230054272	pseudogene	Chr19:9435892-9436948 (-)
NOD/ShiLtJ	ENSMUSG00190052774	pseudogene	Chr19:7728335-7729391 (-)
NZO/HlLtJ	ENSMUSG00225047362	pseudogene	Chr19:13144816-13145872 (-)
PWK/PhJ	ENSLUMG00010009148	pseudogene	Chr19:8042850-8043964 (-)
SPRET/EiJ	ENSMSPG00010051368	pseudogene	Chr19:7856530-7857665 (-)
WSB/EiJ	ENSIUOG00005051321	pseudogene	Chr19:7635486-7636543 (-)

Homology

• Gene Tree
  Gm5692
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm5692
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000101024 (Evidence)
• NCBI Gene
  435588

Representative Sequences			Length	Strain/Species
genomic	435588	NCBI Gene Model | MGI Sequence Detail	853	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:360844 Jiang HC, et al., CD20 is a mammalian odorant receptor expressed in a subset of olfactory sensory neurons that mediates innate avoidance of predators. Res Sq. 2023 Sep 12;
• Latest
  J:360865 Jiang HC, et al., CD20/MS4A1 is a mammalian olfactory receptor expressed in a subset of olfactory sensory neurons that mediates innate avoidance of predators. Nat Commun. 2024 Apr 18;15(1):3360