Gm4793 MGI Mouse Gene Detail - MGI:3646955

Sequence Map

Chr1:135525514-135527672 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646955	lncRNA gene	Chr1:135512511-135527686 (+)
129S1/SvImJ	ENSMUSG00200008287	lncRNA gene	Chr1:133127372-133142575 (+)
A/J	ENSMUSG00195016874	lncRNA gene	Chr1:132201202-132216407 (+)
AKR/J	ENSMUSG00220051104	lncRNA gene	Chr1:132079523-132094729 (+)
BALB/cJ	ENSMUSG00180039949	lncRNA gene	Chr1:132740363-132755537 (+)
C3H/HeJ	ENSMUSG00175047665	lncRNA gene	Chr1:132445328-132460529 (+)
C57BL/6NJ	ENSMUSG00215045773	lncRNA gene	Chr1:132442171-132457345 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002404	antisense lncRNA gene	Chr1:127193445-127208312 (+)
CAST/EiJ	ENSTCUG00005039852	lncRNA gene	Chr1:131373699-131388859 (+)
CBA/J	ENSMUSG00210028426	lncRNA gene	Chr1:132375666-132390873 (+)
DBA/2J	ENSMUSG00185034540	lncRNA gene	Chr1:136750649-136765855 (+)
FVB/NJ	ENSMUSG00205046685	lncRNA gene	Chr1:131711336-131726539 (+)
JF1/MsJ	ENSUMUG00000053240	lncRNA gene	Chr1:135874113-135889297 (+)
LP/J	ENSMUSG00230040119	lncRNA gene	Chr1:136275029-136290202 (+)
NOD/ShiLtJ	ENSMUSG00190047438	lncRNA gene	Chr1:132389729-132404934 (+)
NZO/HlLtJ	ENSMUSG00225020998	lncRNA gene	Chr1:140042341-140057545 (+)
PWK/PhJ	ENSLUMG00010029846	lncRNA gene	Chr1:131498663-131513864 (+)
SPRET/EiJ	ENSMSPG00010012230	lncRNA gene	Chr1:134299693-134314932 (+)
WSB/EiJ	ENSIUOG00005029057	lncRNA gene	Chr1:132134927-132150129 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	215714	NCBI Gene Model \| MGI Sequence Detail	2159	C57BL/6J	± kb
transcript	NR_151586	RefSeq \| MGI Sequence Detail	729	C57BL/6
polypeptide	Q8C8W0	UniProt \| EBI \| MGI Sequence Detail	182	Not Applicable

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Summaries

All 17

Phenotypes 4
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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