Gm8307 Pseudogene Detail

Summary

• Symbol
  Gm8307
• Name
  predicted gene 8307

• Feature Type
  pseudogene
• IDs
  MGI:3646941
  NCBI Gene: 666819
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:45807671-45808643 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 23.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646941	pseudogene	Chr1:45807497-45808646 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010107	pseudogene	Chr1:44848389-44849569 (+)
A/J	MGP_AJ_G0010094	pseudogene	Chr1:43452686-43453866 (+)
AKR/J	MGP_AKRJ_G0010076	pseudogene	Chr1:44081096-44082257 (+)
BALB/cJ	MGP_BALBcJ_G0010082	pseudogene	Chr1:43075146-43076295 (+)
C3H/HeJ	MGP_C3HHeJ_G0010012	pseudogene	Chr1:44503286-44504466 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010331	pseudogene	Chr1:46723992-46725141 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0009843	pseudogene	Chr1:44385620-44386800 (+)
CBA/J	MGP_CBAJ_G0009982	pseudogene	Chr1:48054239-48055419 (+)
DBA/2J	MGP_DBA2J_G0010007	pseudogene	Chr1:42732889-42734069 (+)
FVB/NJ	MGP_FVBNJ_G0010032	pseudogene	Chr1:42180592-42181753 (+)
LP/J	MGP_LPJ_G0010098	pseudogene	Chr1:45144478-45145658 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009991	pseudogene	Chr1:50163479-50164640 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010309	pseudogene	Chr1:44282005-44283185 (+)
PWK/PhJ	MGP_PWKPhJ_G0009752	pseudogene	Chr1:42535293-42536473 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0009911	pseudogene	Chr1:44267072-44268230 (+)

Homology

• Gene Tree
  Gm8307
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8307
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000100843 (Evidence)
• NCBI Gene
  666819

Representative Sequences			Length	Strain/Species
genomic	666819	NCBI Gene Model | MGI Sequence Detail	973	C57BL/6J
transcript	AK140358	GenBank | ENA | DDBJ | MGI Sequence Detail	2220	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;