Gm9017 Gene Detail

Summary

• Symbol
  Gm9017
• Name
  predicted gene 9017

• Feature Type
  lncRNA gene
• IDs
  MGI:3646937
  NCBI Gene: 102636664
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:60425129-60431599 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 35.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646937	lncRNA gene	Chr16:60425129-60434740 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003355	antisense lncRNA gene	Chr16:59904507-59910977 (+)
A/J	MGP_AJ_G0003331	antisense lncRNA gene	Chr16:57389050-57395521 (+)
AKR/J	MGP_AKRJ_G0003314	antisense lncRNA gene	Chr16:59172911-59179381 (+)
BALB/cJ	MGP_BALBcJ_G0003320	antisense lncRNA gene	Chr16:57540694-57547165 (+)
C3H/HeJ	MGP_C3HHeJ_G0003273	antisense lncRNA gene	Chr16:59427467-59433937 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003461	antisense lncRNA gene	Chr16:61639847-61647515 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002979	antisense lncRNA gene	Chr16:56769376-56775982 (+)
CAST/EiJ	MGP_CASTEiJ_G0003237	antisense lncRNA gene	Chr16:59697590-59704148 (+)
CBA/J	MGP_CBAJ_G0003270	antisense lncRNA gene	Chr16:64133286-64139795 (+)
DBA/2J	MGP_DBA2J_G0003275	antisense lncRNA gene	Chr16:57089958-57096429 (+)
FVB/NJ	MGP_FVBNJ_G0003294	antisense lncRNA gene	Chr16:56798352-56804823 (+)
LP/J	MGP_LPJ_G0003348	antisense lncRNA gene	Chr16:59745936-59752571 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003283	antisense lncRNA gene	Chr16:64674228-64697709 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003464	antisense lncRNA gene	Chr16:59270070-59276539 (+)
PWK/PhJ	MGP_PWKPhJ_G0003197	antisense lncRNA gene	Chr16:57332390-57338465 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003140	antisense lncRNA gene	Chr16:59023119-59030115 (+)
WSB/EiJ	MGP_WSBEiJ_G0003271	antisense lncRNA gene	Chr16:59319463-59325950 (+)

Homology

• Gene Tree
  Gm9017
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000089685 (Evidence)
• NCBI Gene
  102636664

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089685	Ensembl Gene Model | MGI Sequence Detail	6471	C57BL/6J
transcript	ENSMUST00000159613	Ensembl | MGI Sequence Detail	676	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;