Gm4949 Pseudogene Detail

Summary

• Symbol
  Gm4949
• Name
  predicted gene 4949

• Feature Type
  pseudogene
• IDs
  MGI:3646890
  NCBI Gene: 240219
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:38492497-38493591 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 20.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  172 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646890	pseudogene	Chr18:38492494-38493591 (-)
129S1/SvImJ	ENSMUSG00200044381	pseudogene	Chr18:35489766-35490863 (-)
A/J	ENSMUSG00195038241	pseudogene	Chr18:35642374-35643471 (-)
AKR/J	ENSMUSG00220017471	pseudogene	Chr18:35610412-35611509 (-)
BALB/cJ	ENSMUSG00180021649	pseudogene	Chr18:36091994-36093091 (-)
C3H/HeJ	ENSMUSG00175042083	pseudogene	Chr18:35605486-35606583 (-)
C57BL/6NJ	ENSMUSG00215028361	pseudogene	Chr18:35362149-35363246 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023985	pseudogene	Chr18:35222364-35223461 (-)
CBA/J	ENSMUSG00210021673	pseudogene	Chr18:35634011-35635108 (-)
DBA/2J	ENSMUSG00185020887	pseudogene	Chr18:35568596-35569693 (-)
FVB/NJ	ENSMUSG00205033258	pseudogene	Chr18:35269412-35270509 (-)
JF1/MsJ	ENSUMUG00000047705	pseudogene	Chr18:35700081-35701178 (-)
LP/J	ENSMUSG00230048620	pseudogene	Chr18:37683875-37684972 (-)
NOD/ShiLtJ	ENSMUSG00190022034	pseudogene	Chr18:35353809-35354906 (-)
NZO/HlLtJ	ENSMUSG00225047370	pseudogene	Chr18:37590645-37591742 (-)
PWK/PhJ	ENSLUMG00010013528	pseudogene	Chr18:35852756-35853853 (-)
SPRET/EiJ	ENSMSPG00010024090	pseudogene	Chr18:35880235-35881357 (-)
WSB/EiJ	ENSIUOG00005007989	pseudogene	Chr18:35349497-35350594 (-)

Homology

• Gene Tree
  Gm4949
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118140 (Evidence)
• NCBI Gene
  240219

Representative Sequences			Length	Strain/Species
genomic	240219	NCBI Gene Model | MGI Sequence Detail	1095	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;