Gm7645 Pseudogene Detail

Summary

• Symbol
  Gm7645
• Name
  predicted gene 7645
• Synonyms
  Gm14447

• Feature Type
  pseudogene
• IDs
  MGI:3646877
  NCBI Gene: 100417050
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:180933941-180934728 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 103.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  5 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646877	pseudogene	Chr2:180933934-180934925 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011992	pseudogene	Chr2:187874324-187875111 (+)
A/J	MGP_AJ_G0011982	pseudogene	Chr2:180142807-180143594 (+)
AKR/J	MGP_AKRJ_G0014220	pseudogene	ChrX:2581997-2583266 (+)
BALB/cJ	MGP_BALBcJ_G0011961	pseudogene	Chr2:180608505-180617499 (+)
C3H/HeJ	MGP_C3HHeJ_G0014075	pseudogene	ChrX:2554683-2555952 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012259	pseudogene	Chr2:193298124-193298911 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012510	pseudogene	ChrX:2024358-2027212 (+)
CAST/EiJ	MGP_CASTEiJ_G0013724	pseudogene	ChrX:2442335-2443605 (+)
CBA/J	MGP_CBAJ_G0011811	pseudogene	Chr2:200312934-200313721 (+)
DBA/2J	MGP_DBA2J_G0011864	pseudogene	Chr2:179243037-179243824 (+)
FVB/NJ	MGP_FVBNJ_G0011871	pseudogene	Chr2:177858959-177859746 (+)
LP/J	MGP_LPJ_G0011932	pseudogene	Chr2:187897092-187897879 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011872	pseudogene	Chr2:202868077-202874986 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014431	pseudogene	Chr8:18210846-18211633 (-)
PWK/PhJ	MGP_PWKPhJ_G0013541	pseudogene	ChrX:2419114-2420375 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011284	pseudogene	Chr2:182003527-182004314 (+)
WSB/EiJ	MGP_WSBEiJ_G0013789	pseudogene	ChrX:2500325-2501594 (+)

Homology

• Gene Tree
  Gm7645
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084033 (Evidence)
• NCBI Gene
  100417050

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084033	Ensembl Gene Model | MGI Sequence Detail	788	C57BL/6J
transcript	ENSMUST00000119008	Ensembl | MGI Sequence Detail	788	Not Applicable

Other
Accession IDs

MGI:3651227

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm7645:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr22299	Chr2:180934530-180934543 (+)	596 bp