Gm8128 Pseudogene Detail

Summary

• Symbol
  Gm8128
• Name
  predicted gene 8128

• Feature Type
  pseudogene
• IDs
  MGI:3646862
  NCBI Gene: 666486
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:22852782-22853274 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 13.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646862	pseudogene	Chr16:22852698-22853341 (+)
129S1/SvImJ	ENSMUSG00200047219	pseudogene	Chr16:19856555-19857047 (+)
A/J	ENSMUSG00195036736	pseudogene	Chr16:19411048-19411540 (+)
AKR/J	ENSMUSG00220046795	pseudogene	Chr16:19730457-19730949 (+)
BALB/cJ	ENSMUSG00180042312	pseudogene	Chr16:19651642-19652134 (+)
C3H/HeJ	ENSMUSG00175050261	pseudogene	Chr16:19796574-19797066 (+)
C57BL/6NJ	ENSMUSG00215043102	pseudogene	Chr16:19523776-19524268 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045531	pseudogene	Chr16:20128082-20128574 (+)
CBA/J	ENSMUSG00210047667	pseudogene	Chr16:19818263-19818755 (+)
DBA/2J	ENSMUSG00185035927	pseudogene	Chr16:19757038-19757530 (+)
FVB/NJ	ENSMUSG00205048433	pseudogene	Chr16:19757702-19758194 (+)
JF1/MsJ	ENSUMUG00000054414	pseudogene	Chr16:19979831-19980326 (+)
LP/J	ENSMUSG00230033476	pseudogene	Chr16:22336086-22336578 (+)
NOD/ShiLtJ	ENSMUSG00190050050	pseudogene	Chr16:19898466-19898958 (+)
NZO/HlLtJ	ENSMUSG00225038813	pseudogene	Chr16:25587197-25587689 (+)
PWK/PhJ	ENSLUMG00010050094	pseudogene	Chr16:19803103-19803598 (+)
SPRET/EiJ	ENSMSPG00010047694	pseudogene	Chr16:19685517-19686009 (+)
WSB/EiJ	ENSIUOG00005044759	pseudogene	Chr16:19997713-19998208 (+)

Homology

• Gene Tree
  Gm8128
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116996 (Evidence)
• NCBI Gene
  666486

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116996	Ensembl Gene Model | MGI Sequence Detail	493	C57BL/6J
transcript	ENSMUST00000231562	Ensembl | MGI Sequence Detail	493	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;