Gm8834 Pseudogene Detail

Summary

• Symbol
  Gm8834
• Name
  predicted gene 8834

• Feature Type
  pseudogene
• IDs
  MGI:3646859
  NCBI Gene: 667824
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr10:34774252-34774816 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 18.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646859	pseudogene	Chr10:34774252-34774816 (+)
129S1/SvImJ	ENSMUSG00200009088	pseudogene	Chr10:31620310-31620874 (+)
A/J	ENSMUSG00195018742	pseudogene	Chr10:31896510-31897074 (+)
AKR/J	ENSMUSG00220027932	pseudogene	Chr10:31593809-31594373 (+)
BALB/cJ	ENSMUSG00180016467	pseudogene	Chr10:32016517-32017081 (+)
C3H/HeJ	ENSMUSG00175012375	pseudogene	Chr10:31771475-31772039 (+)
C57BL/6NJ	ENSMUSG00215010040	pseudogene	Chr10:31561117-31561681 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030198	pseudogene	Chr10:32023947-32024278 (+)
CBA/J	ENSMUSG00210025814	pseudogene	Chr10:31698803-31699367 (+)
DBA/2J	ENSMUSG00185008522	pseudogene	Chr10:31851653-31852217 (+)
FVB/NJ	ENSMUSG00205014603	pseudogene	Chr10:31814607-31815171 (+)
JF1/MsJ	ENSUMUG00000039549	pseudogene	Chr10:31630370-31630934 (+)
LP/J	ENSMUSG00230015803	pseudogene	Chr10:33617637-33618201 (+)
NOD/ShiLtJ	ENSMUSG00190036740	pseudogene	Chr10:31966336-31966900 (+)
NZO/HlLtJ	ENSMUSG00225034216	pseudogene	Chr10:37875568-37876132 (+)
PWK/PhJ	ENSLUMG00010008186	pseudogene	Chr10:31657474-31658038 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015462	pseudogene	Chr10:31393669-31394233 (+)

Homology

• Gene Tree
  Gm8834
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm8834
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000110935 (Evidence)
• NCBI Gene
  667824

Representative Sequences			Length	Strain/Species
genomic	667824	NCBI Gene Model | MGI Sequence Detail	565	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm8834:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92942	Chr10:34774218-34774225 (+)	-30 bp
Tssr92943	Chr10:34774693-34774706 (+)	448 bp
Tssr92944	Chr10:34774773-34774780 (+)	525 bp