Gm7748 Pseudogene Detail

Summary

• Symbol
  Gm7748
• Name
  predicted gene 7748

• Feature Type
  pseudogene
• IDs
  MGI:3646851
  NCBI Gene: 665682
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:15426971-15427379 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 10.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646851	pseudogene	Chr16:15426940-15427397 (+)
129S1/SvImJ	ENSMUSG00200048869	pseudogene	Chr16:12419481-12419889 (+)
A/J	ENSMUSG00195035468	pseudogene	Chr16:11977950-11978358 (+)
AKR/J	ENSMUSG00220046657	pseudogene	Chr16:12289155-12289563 (+)
BALB/cJ	ENSMUSG00180043268	pseudogene	Chr16:12217934-12218342 (+)
C3H/HeJ	ENSMUSG00175051220	pseudogene	Chr16:12364222-12364630 (+)
C57BL/6NJ	ENSMUSG00215041756	pseudogene	Chr16:12085765-12086173 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046425	pseudogene	Chr16:12263823-12264231 (+)
CBA/J	ENSMUSG00210048062	pseudogene	Chr16:12381143-12381551 (+)
DBA/2J	ENSMUSG00185034107	pseudogene	Chr16:12326650-12327058 (+)
FVB/NJ	ENSMUSG00205046782	pseudogene	Chr16:12332986-12333394 (+)
JF1/MsJ	ENSUMUG00000054976	pseudogene	Chr16:12406868-12407277 (+)
LP/J	ENSMUSG00230046014	pseudogene	Chr16:14905182-14905590 (+)
NOD/ShiLtJ	ENSMUSG00190050215	pseudogene	Chr16:12466644-12467051 (+)
NZO/HlLtJ	ENSMUSG00225032250	pseudogene	Chr16:18150427-18150835 (+)
PWK/PhJ	ENSLUMG00010050448	pseudogene	Chr16:12297986-12298395 (+)
SPRET/EiJ	ENSMSPG00010047901	pseudogene	Chr16:12285512-12285930 (+)
WSB/EiJ	ENSIUOG00005045075	pseudogene	Chr16:12426569-12426977 (+)

Homology

• Gene Tree
  Gm7748
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116140 (Evidence)
• NCBI Gene
  665682

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116140	Ensembl Gene Model | MGI Sequence Detail	409	C57BL/6J
transcript	ENSMUST00000230520	Ensembl | MGI Sequence Detail	409	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;