Gm9364 Pseudogene Detail

Summary

• Symbol
  Gm9364
• Name
  predicted gene 9364

• Feature Type
  pseudogene
• IDs
  MGI:3646838
  NCBI Gene: 102637985
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:122655562-122656021 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 53.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646838	pseudogene	Chr3:122655540-122656327 (+)
129S1/SvImJ	ENSMUSG00200027066	pseudogene	Chr3:119350918-119351378 (+)
A/J	ENSMUSG00195016289	pseudogene	Chr3:119565651-119566110 (+)
AKR/J	ENSMUSG00220025588	pseudogene	Chr3:117949563-117950022 (+)
BALB/cJ	ENSMUSG00180030724	pseudogene	Chr3:119502154-119502613 (+)
C3H/HeJ	ENSMUSG00175027972	pseudogene	Chr3:119048936-119049395 (+)
C57BL/6NJ	ENSMUSG00215008432	pseudogene	Chr3:119795506-119795965 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031988	pseudogene	Chr3:120078045-120078505 (+)
CBA/J	ENSMUSG00210003054	pseudogene	Chr3:119679852-119680311 (+)
DBA/2J	ENSMUSG00185007802	pseudogene	Chr3:120236781-120237241 (+)
FVB/NJ	ENSMUSG00205007934	pseudogene	Chr3:118613558-118614017 (+)
JF1/MsJ	ENSUMUG00000003299	pseudogene	Chr3:119042546-119043006 (+)
LP/J	ENSMUSG00230004312	pseudogene	Chr3:122202664-122203124 (+)
NOD/ShiLtJ	ENSMUSG00190033669	pseudogene	Chr3:120624561-120625020 (+)
NZO/HlLtJ	ENSMUSG00225003623	pseudogene	Chr3:124683502-124683961 (+)
PWK/PhJ	ENSLUMG00010009509	pseudogene	Chr3:119040937-119041397 (+)
SPRET/EiJ	ENSMSPG00010030336	pseudogene	Chr3:119796809-119797264 (+)
WSB/EiJ	ENSIUOG00005007227	pseudogene	Chr3:119847647-119848106 (+)

Homology

• Gene Tree
  Gm9364
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9364
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106059 (Evidence)
• NCBI Gene
  102637985

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106059	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000199220	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm9364:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31529	Chr3:122653918-122653919 (+)	-1,643 bp