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Gm5532 Gene Detail
Summary
  • Symbol
    Gm5532
  • Name
    predicted gene 5532
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3646828
    NCBI Gene: 433367
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:155395919-155402857 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 66.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646828
 lncRNA gene Chr1:155395918-155402965 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005007
 lincRNA gene Chr1:160451857-160459647 (-)
A/J MGP_AJ_G0004989
 lincRNA gene Chr1:154005991-154014227 (-)
AKR/J MGP_AKRJ_G0004967
 lincRNA gene Chr1:158747469-158755247 (-)
BALB/cJ MGP_BALBcJ_G0004971
 lincRNA gene Chr1:154515971-154523594 (-)
C3H/HeJ MGP_C3HHeJ_G0004919
 lincRNA gene Chr1:158870238-158877566 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005121
 lincRNA gene Chr1:165972668-165980990 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004532
 lincRNA gene Chr1:146234298-146241500 (-)
CAST/EiJ MGP_CASTEiJ_G0004867
 lincRNA gene Chr1:158391380-158398824 (-)
CBA/J MGP_CBAJ_G0004910
 lincRNA gene Chr1:171812548-171820663 (-)
DBA/2J MGP_DBA2J_G0004929
 lincRNA gene Chr1:152985413-152992699 (-)
FVB/NJ MGP_FVBNJ_G0004950
 lincRNA gene Chr1:151444510-151453546 (-)
LP/J MGP_LPJ_G0005007
 lincRNA gene Chr1:161601271-161611228 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004934
 lincRNA gene Chr1:179401074-179410113 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005126
 lincRNA gene Chr1:158549417-158556399 (-)
PWK/PhJ MGP_PWKPhJ_G0004819
 lincRNA gene Chr1:152054970-152062363 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004745
 lincRNA gene Chr1:157286071-157293220 (-)
WSB/EiJ MGP_WSBEiJ_G0004914
 lincRNA gene Chr1:158612254-158621963 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Gm5532
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433367 NCBI Gene Model | MGI Sequence Detail 6939 C57BL/6J ±  kb
transcript NR_132128 RefSeq | MGI Sequence Detail 1751 C57BL/6  
polypeptide Q3UI92 UniProt | EBI | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 14
    Phenotypes 5
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory