Gal3st2c MGI Mouse Gene Detail - MGI:3646771 - galactose-3-O-sulfotransferase 2C

Symbol

Gal3st2c
Name

galactose-3-O-sulfotransferase 2C
Synonyms

Gm6086

Feature Type

protein coding gene
IDs

MGI:3646771
NCBI Gene: 619597
Alliance

genome feature page
Transcription Start Sites

1 TSS

Sequence Map

Chr1:93918227-93939261 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 1, 47.45 cM
Mapping Data

1 experiment

SNPs within 2kb

725 from dbSNP Build 142
Strain Annotations

19

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646771	protein coding gene	Chr1:93918227-93944869 (+)
129S1/SvImJ	ENSMUSG00200036388	protein coding gene	Chr1:91059481-91085937 (+)
A/J	ENSMUSG00195027113	protein coding gene	Chr1:90618451-90644908 (+)
AKR/J	ENSMUSG00220000194	protein coding gene	Chr1:90848907-90875549 (+)
BALB/cJ	ENSMUSG00180005440	protein coding gene	Chr1:90935646-90962104 (+)
C3H/HeJ	ENSMUSG00175001207	protein coding gene	Chr1:90813382-90839830 (+)
C57BL/6NJ	ENSMUSG00215000333	protein coding gene	Chr1:90819671-90846308 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0014467	protein coding gene	Chr1:86462891-86490292 (+)
CAST/EiJ	ENSTCUG00005006911	protein coding gene	Chr1:90598234-90624839 (+)
CBA/J	ENSMUSG00210000051	protein coding gene	Chr1:90658468-90684925 (+)
DBA/2J	ENSMUSG00185012911	protein coding gene	Chr1:95131747-95158203 (+)
FVB/NJ	ENSMUSG00205037863	protein coding gene	Chr1:90068127-90094589 (+)
JF1/MsJ	ENSUMUG00000013761	protein coding gene	Chr1:93872912-93900575 (+)
LP/J	ENSMUSG00230022971	protein coding gene	Chr1:94395545-94422005 (+)
NOD/ShiLtJ	ENSMUSG00190024767	protein coding gene	Chr1:90703338-90729797 (+)
NZO/HlLtJ	ENSMUSG00225002151	protein coding gene	Chr1:98293350-98319784 (+)
PWK/PhJ	ENSLUMG00010041744	protein coding gene	Chr1:90276728-90304384 (+)
SPRET/EiJ	ENSMSPG00010000653	protein coding gene	Chr1:92289385-92303983 (+)
WSB/EiJ	ENSIUOG00005037695	protein coding gene	Chr1:90363116-90389576 (+)

Human Ortholog

GAL3ST2, galactose-3-O-sulfotransferase 2

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

GAL3ST2, galactose-3-O-sulfotransferase 2
Synonyms

GAL3ST-2, GP3ST
Links

HGNC:24869

NCBI Gene ID: 64090

UniProt: Q9H3Q3
Chr Location

2q37.3; chr2:241776822-241804287 (+) GRCh38

MGI Vertebrate Homology

Gal3st2c stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: GAL3ST2
Gene Tree

Gal3st2c

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

2
Chemically induced (other)

1
Radiation induced

1
Genomic Mutations

2 involving Gal3st2c
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

16 strains or lines available

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All GO Annotations

6
GO References

4

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

1

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

31
RefSeq

4
UniProt

2
CCDS

CCDS48330.1

Ensembl

ENSMUSG00000073608 (Evidence)
NCBI Gene

619597

			Length	Strain/Species	Flank
genomic	619597	NCBI Gene Model \| MGI Sequence Detail	21035	C57BL/6J	± kb
transcript	NM_001039219	RefSeq \| MGI Sequence Detail	4063	C57BL/6
polypeptide	NP_001034308	RefSeq \| MGI Sequence Detail	396	C57BL/6

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UniProt

2 Sequences
InterPro Domains

IPR009729 Galactose-3-O-sulfotransferase

IPR027417 P-loop containing nucleoside triphosphate hydrolase

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All nucleic 1

cDNA 1

Microarray probesets 1

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MGI:5896368

Summaries

All 18

Gene Ontology 4

Phenotypes 4
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gal3st2c:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8208	Chr1:93923978-93924002 (+)	5,763 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24