Gm6085 Pseudogene Detail

Summary

• Symbol
  Gm6085
• Name
  predicted gene 6085

• Feature Type
  pseudogene
• IDs
  MGI:3646770
  NCBI Gene: 619596
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:4758792-4759632 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 1.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646770	pseudogene	Chr1:4758157-4759632 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0009961	pseudogene	Chr1:1721610-1723940 (-)
A/J	MGP_AJ_G0009942	pseudogene	Chr1:1800268-1801732 (-)
AKR/J	MGP_AKRJ_G0009925	pseudogene	Chr1:1776422-1777893 (-)
BALB/cJ	MGP_BALBcJ_G0009930	pseudogene	Chr1:1731052-1732526 (-)
C3H/HeJ	MGP_C3HHeJ_G0009858	pseudogene	Chr1:1748836-1750283 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010175	pseudogene	Chr1:1804070-1805541 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010205	pseudogene	Chr17:62889100-62890532 (-)
CAST/EiJ	MGP_CASTEiJ_G0009714	pseudogene	Chr1:1927620-1929083 (-)
CBA/J	MGP_CBAJ_G0009834	pseudogene	Chr1:1920995-1922442 (-)
DBA/2J	MGP_DBA2J_G0009858	pseudogene	Chr1:1702647-1704108 (-)
FVB/NJ	MGP_FVBNJ_G0009885	pseudogene	Chr1:1676146-1678238 (-)
LP/J	MGP_LPJ_G0009955	pseudogene	Chr1:1894931-1896407 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009844	pseudogene	Chr1:2100452-2101921 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010153	pseudogene	Chr1:1737651-1739119 (-)
PWK/PhJ	MGP_PWKPhJ_G0009620	pseudogene	Chr1:1640983-1642560 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009437	pseudogene	Chr1:1914351-1915781 (-)
WSB/EiJ	MGP_WSBEiJ_G0009778	pseudogene	Chr1:1726883-1728333 (-)

Homology

• Gene Tree
  Gm6085
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098104 (Evidence)
• NCBI Gene
  619596

Representative Sequences			Length	Strain/Species
genomic	619596	NCBI Gene Model | MGI Sequence Detail	841	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;