Gm5120 Pseudogene Detail

Summary

• Symbol
  Gm5120
• Name
  predicted gene 5120

• Feature Type
  pseudogene
• IDs
  MGI:3646745
  NCBI Gene: 330907
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:26871445-26873855 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 11.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646745	pseudogene	Chr9:26871442-26873855 (-)
129S1/SvImJ	ENSMUSG00200008373	pseudogene	Chr9:23861083-23863494 (-)
A/J	ENSMUSG00195006498	pseudogene	Chr9:23667250-23669663 (-)
AKR/J	ENSMUSG00220010613	pseudogene	Chr9:23665177-23667590 (-)
BALB/cJ	ENSMUSG00180006967	pseudogene	Chr9:23801417-23803830 (-)
C3H/HeJ	ENSMUSG00175019978	pseudogene	Chr9:23777860-23780273 (-)
C57BL/6NJ	ENSMUSG00215009121	pseudogene	Chr9:23763210-23765623 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019235	pseudogene	Chr9:23756203-23758616 (-)
CBA/J	ENSMUSG00210022147	pseudogene	Chr9:23821213-23823624 (-)
DBA/2J	ENSMUSG00185002520	pseudogene	Chr9:23859926-23862339 (-)
FVB/NJ	ENSMUSG00205004993	pseudogene	Chr9:24149948-24152359 (-)
JF1/MsJ	ENSUMUG00000014943	pseudogene	Chr9:23992290-23994705 (-)
LP/J	ENSMUSG00230005336	pseudogene	Chr9:24267001-24269412 (-)
NOD/ShiLtJ	ENSMUSG00190006343	pseudogene	Chr9:23853210-23855621 (-)
NZO/HlLtJ	ENSMUSG00225015021	pseudogene	Chr9:24280130-24282541 (-)
PWK/PhJ	ENSLUMG00010009602	pseudogene	Chr9:23885521-23887934 (-)
SPRET/EiJ	ENSMSPG00010002148	pseudogene	Chr9:24174647-24177071 (-)
WSB/EiJ	ENSIUOG00005016145	pseudogene	Chr9:23329371-23331781 (-)

Homology

• Gene Tree
  Gm5120
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111151 (Evidence)
• NCBI Gene
  330907

Representative Sequences			Length	Strain/Species
genomic	330907	NCBI Gene Model | MGI Sequence Detail	2411	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;