Gm6884 Pseudogene Detail

Summary

• Symbol
  Gm6884
• Name
  predicted gene 6884

• Feature Type
  pseudogene
• IDs
  MGI:3646729
  NCBI Gene: 628480
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:23921490-23922104 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 11.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646729	pseudogene	Chr10:23921446-23922164 (+)
129S1/SvImJ	ENSMUSG00200010083	pseudogene	Chr10:20759341-20759955 (+)
A/J	ENSMUSG00195014190	pseudogene	Chr10:21065129-21065743 (+)
AKR/J	ENSMUSG00220011235	pseudogene	Chr10:20745461-20746075 (+)
BALB/cJ	ENSMUSG00180018286	pseudogene	Chr10:21188396-21189010 (+)
C3H/HeJ	ENSMUSG00175025847	pseudogene	Chr10:20862293-20862907 (+)
C57BL/6NJ	ENSMUSG00215014376	pseudogene	Chr10:20709297-20709911 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009407	pseudogene	Chr10:20066316-20066924 (+)
CAST/EiJ	ENSTCUG00005013852	pseudogene	Chr10:20465269-20465905 (+)
CBA/J	ENSMUSG00210023611	pseudogene	Chr10:20825720-20826334 (+)
DBA/2J	ENSMUSG00185007271	pseudogene	Chr10:20995652-20996266 (+)
FVB/NJ	ENSMUSG00205010427	pseudogene	Chr10:21007454-21008068 (+)
JF1/MsJ	ENSUMUG00000020178	pseudogene	Chr10:20788848-20789462 (+)
LP/J	ENSMUSG00230011724	pseudogene	Chr10:22793950-22794564 (+)
NOD/ShiLtJ	ENSMUSG00190016143	pseudogene	Chr10:21117495-21118109 (+)
NZO/HlLtJ	ENSMUSG00225030591	pseudogene	Chr10:27048560-27049174 (+)
PWK/PhJ	ENSLUMG00010010236	pseudogene	Chr10:20691447-20692061 (+)
SPRET/EiJ	ENSMSPG00010015316	pseudogene	Chr10:21390859-21391481 (+)
WSB/EiJ	ENSIUOG00005031277	pseudogene	Chr10:20366780-20367394 (+)

Homology

• Gene Tree
  Gm6884
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Targeted
  3
• Genomic Mutations
  4 involving Gm6884
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082960 (Evidence)
• NCBI Gene
  628480

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082960	Ensembl Gene Model | MGI Sequence Detail	615	C57BL/6J
transcript	ENSMUST00000119318	Ensembl | MGI Sequence Detail	615	Not Applicable

References

• Summaries
  All 17

  Phenotypes 12
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:386101 Park S, et al., Trace amine-associated receptors (TAARs)2-9 knockout mice exhibit reduced wakefulness and disrupted REM sleep. Front Psychiatry. 2024;15:1467964