Gm7337 Pseudogene Detail

Summary

• Symbol
  Gm7337
• Name
  predicted gene 7337

• Feature Type
  pseudogene
• IDs
  MGI:3646689
  NCBI Gene: 654494
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:87998377-87999501 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 43.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646689	pseudogene	Chr5:87998218-88000871 (+)
129S1/SvImJ	ENSMUSG00200010153	pseudogene	Chr5:83729552-83732206 (+)
A/J	ENSMUSG00195026019	pseudogene	Chr5:82899788-82902445 (+)
AKR/J	ENSMUSG00220012379	pseudogene	Chr5:83039878-83042532 (+)
BALB/cJ	ENSMUSG00180026614	pseudogene	Chr5:82732578-82735236 (+)
C3H/HeJ	ENSMUSG00175046601	pseudogene	Chr5:84807744-84810404 (+)
C57BL/6NJ	ENSMUSG00215035383	pseudogene	Chr5:83592826-83595480 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036890	pseudogene	Chr5:80806470-80807528 (+)
CAST/EiJ	ENSTCUG00005037883	pseudogene	Chr5:82442604-82445264 (+)
CBA/J	ENSMUSG00210006537	pseudogene	Chr5:83623036-83625669 (+)
DBA/2J	ENSMUSG00185041815	pseudogene	Chr5:85542241-85544897 (+)
FVB/NJ	ENSMUSG00205034735	pseudogene	Chr5:82446353-82449009 (+)
JF1/MsJ	ENSUMUG00000001102	pseudogene	Chr5:89997981-90000620 (+)
LP/J	ENSMUSG00230001838	pseudogene	Chr5:90259553-90262207 (+)
NOD/ShiLtJ	ENSMUSG00190040725	pseudogene	Chr5:82484319-82486976 (+)
NZO/HlLtJ	ENSMUSG00225010097	pseudogene	Chr5:95288539-95291201 (+)
PWK/PhJ	ENSLUMG00010029541	pseudogene	Chr5:82507787-82510430 (+)
SPRET/EiJ	ENSMSPG00010036159	pseudogene	Chr5:84793125-84796610 (+)
WSB/EiJ	ENSIUOG00005029649	pseudogene	Chr5:85441900-85444549 (+)

Homology

• Gene Tree
  Gm7337
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm7337
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  12 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000067156 (Evidence)
• NCBI Gene
  654494

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000067156	Ensembl Gene Model | MGI Sequence Detail	1125	C57BL/6J
transcript	ENSMUST00000180954	Ensembl | MGI Sequence Detail	1125	Not Applicable
polypeptide	Q3V0F6	UniProt | EBI | MGI Sequence Detail	385	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR032714 Cilium assembly protein DZIP1, N-terminal
  IPR051241 DZIP and RILPL
  IPR013087 Zinc finger C2H2-type

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 14

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17