Gm5154 Pseudogene Detail

Summary

• Symbol
  Gm5154
• Name
  predicted gene 5154

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3646668
  NCBI Gene: 381818
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:132415494-132418685 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 64.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  247 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646668	pseudogene	Chr6:132415494-132418687 (-)
129S1/SvImJ	ENSMUSG00200046901	pseudogene	Chr6:129917498-129920685 (-)
A/J	ENSMUSG00195033192	pseudogene	Chr6:128573859-128576992 (-)
AKR/J	ENSMUSG00220042010	pseudogene	Chr6:127110706-127113839 (-)
BALB/cJ	ENSMUSG00180041840	pseudogene	Chr6:128641543-128644676 (-)
C3H/HeJ	ENSMUSG00175041457	pseudogene	Chr6:128590872-128594005 (-)
C57BL/6NJ	ENSMUSG00215034800	pseudogene	Chr6:129061332-129064520 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042683	pseudogene	Chr6:129397878-129400903 (-)
CBA/J	ENSMUSG00210017034	pseudogene	Chr6:128610367-128613500 (-)
DBA/2J	ENSMUSG00185044090	pseudogene	Chr6:129308943-129312076 (-)
FVB/NJ	ENSMUSG00205039116	pseudogene	Chr6:128093535-128096725 (-)
JF1/MsJ	ENSUMUG00000047091	pseudogene	Chr6:127977814-127980946 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190042882	pseudogene	Chr6:129373614-129376799 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010045429	pseudogene	Chr6:127100724-127103858 (-)
SPRET/EiJ	ENSMSPG00010044666	pseudogene	Chr6:130752956-130755924 (-)
WSB/EiJ	ENSIUOG00005046643	pseudogene	Chr6:129639914-129643101 (-)

Homology

• Gene Tree
  Gm5154
  

Expression

• Assay Results
  597
• cDNA Data
  10

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  7

• Ensembl
  ENSMUSG00000108041 (Evidence)
• NCBI Gene
  381818

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108041	Ensembl Gene Model | MGI Sequence Detail	3192	C57BL/6J
transcript	ENSMUST00000203971	Ensembl | MGI Sequence Detail	399	Not Applicable
polypeptide	XP_054875498	RefSeq | MGI Sequence Detail	411	C57BL/6J

Molecular
Reagents

• All nucleic 10

  cDNA 10

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5154:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63702	Chr6:132418708-132418715 (-)	-27 bp