Gm6575 Pseudogene Detail

Summary

• Symbol
  Gm6575
• Name
  predicted gene 6575

• Feature Type
  pseudogene
• IDs
  MGI:3646645
  NCBI Gene: 625310
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:18213146-18213842 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 6.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646645	pseudogene	Chr13:18213146-18214041 (+)
129S1/SvImJ	ENSMUSG00200014576	pseudogene	Chr13:15452156-15452852 (+)
A/J	ENSMUSG00195040823	pseudogene	Chr13:14562990-14563686 (+)
AKR/J	ENSMUSG00220036294	pseudogene	Chr13:14474939-14475633 (+)
BALB/cJ	ENSMUSG00180038338	pseudogene	Chr13:14918869-14919565 (+)
C3H/HeJ	ENSMUSG00175038683	pseudogene	Chr13:15019389-15020085 (+)
C57BL/6NJ	ENSMUSG00215033841	pseudogene	Chr13:14969400-14970096 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014719	pseudogene	Chr13:15049168-15049864 (+)
CBA/J	ENSMUSG00210030950	pseudogene	Chr13:14879300-14879996 (+)
DBA/2J	ENSMUSG00185013931	pseudogene	Chr13:15580666-15581362 (+)
FVB/NJ	ENSMUSG00205052563	pseudogene	Chr13:14732452-14733148 (+)
JF1/MsJ	ENSUMUG00000024397	pseudogene	Chr13:15296024-15296718 (+)
LP/J	ENSMUSG00230036652	pseudogene	Chr13:24983072-24983768 (+)
NOD/ShiLtJ	ENSMUSG00190022863	pseudogene	Chr13:14842780-14843476 (+)
NZO/HlLtJ	ENSMUSG00225032550	pseudogene	Chr13:18732429-18733125 (+)
PWK/PhJ	ENSLUMG00010032285	pseudogene	Chr13:14276381-14277077 (+)
SPRET/EiJ	ENSMSPG00010021161	pseudogene	Chr13:13929808-13930517 (+)
WSB/EiJ	ENSIUOG00005036022	pseudogene	Chr13:14171809-14172505 (+)

Homology

• Gene Tree
  Gm6575
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113496 (Evidence)
• NCBI Gene
  625310

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113496	Ensembl Gene Model | MGI Sequence Detail	697	C57BL/6J
transcript	ENSMUST00000222946	Ensembl | MGI Sequence Detail	697	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;