About   Help   FAQ
Gm5218 Pseudogene Detail
Summary
  • Symbol
    Gm5218
  • Name
    predicted gene 5218
Location &
Maps
more
  • Sequence Map
    Chr15:81383282-81383746 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 38.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646583
 pseudogene Chr15:81383282-81396427 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022114
 protein coding gene Chr15:81923187-81923651 (-)
A/J MGP_AJ_G0022075
 protein coding gene Chr15:79048337-79048751 (-)
AKR/J MGP_AKRJ_G0022050
 protein coding gene Chr15:81239916-81240548 (-)
BALB/cJ MGP_BALBcJ_G0022081
 protein coding gene Chr15:79084115-79084538 (-)
C3H/HeJ MGP_C3HHeJ_G0021852
 protein coding gene Chr15:81245622-81246055 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022524
 protein coding gene Chr15:85135928-85139483 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0021946
 protein coding gene Chr15:78528838-78529271 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0022014
 protein coding gene Chr15:82086693-82088180 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021944
 protein coding gene Chr15:92756464-92756928 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022538
 protein coding gene Chr15:81314239-81314703 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5218
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091198 Ensembl Gene Model | MGI Sequence Detail 465 C57BL/6J ±  kb
transcript ENSMUST00000172270 Ensembl | MGI Sequence Detail 465 Not Applicable  
polypeptide XP_036015591 RefSeq | MGI Sequence Detail 232 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 21
    Phenotypes 17
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory