Gm8596 Pseudogene Detail

Summary

• Symbol
  Gm8596
• Name
  predicted gene 8596

• Feature Type
  pseudogene
• IDs
  MGI:3646555
  NCBI Gene: 667371
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:133457217-133458008 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 57.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646555	pseudogene	Chr1:133457198-133458048 (+)
129S1/SvImJ	ENSMUSG00200009125	pseudogene	Chr1:131058029-131058791 (+)
A/J	ENSMUSG00195045066	pseudogene	Chr1:130124203-130124994 (+)
AKR/J	ENSMUSG00220051030	pseudogene	Chr1:130002196-130002958 (+)
BALB/cJ	ENSMUSG00180039410	pseudogene	Chr1:130672383-130673174 (+)
C3H/HeJ	ENSMUSG00175047896	pseudogene	Chr1:130368624-130369415 (+)
C57BL/6NJ	ENSMUSG00215046192	pseudogene	Chr1:130382477-130383268 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009273	pseudogene	Chr1:125139646-125140431 (+)
CAST/EiJ	ENSTCUG00005039256	pseudogene	Chr1:129294767-129295529 (+)
CBA/J	ENSMUSG00210028684	pseudogene	Chr1:130297736-130298498 (+)
DBA/2J	ENSMUSG00185033114	pseudogene	Chr1:134668985-134669747 (+)
FVB/NJ	ENSMUSG00205046035	pseudogene	Chr1:129634213-129634975 (+)
JF1/MsJ	ENSUMUG00000049483	pseudogene	Chr1:133821429-133822191 (+)
LP/J	ENSMUSG00230039168	pseudogene	Chr1:134207368-134208159 (+)
NOD/ShiLtJ	ENSMUSG00190045762	pseudogene	Chr1:130311920-130312682 (+)
NZO/HlLtJ	ENSMUSG00225021867	pseudogene	Chr1:137968662-137969424 (+)
PWK/PhJ	ENSLUMG00010029336	pseudogene	Chr1:129439520-129440282 (+)
SPRET/EiJ	ENSMSPG00010046600	pseudogene	Chr1:132241575-132242357 (+)
WSB/EiJ	ENSIUOG00005049104	pseudogene	Chr1:130043239-130044001 (+)

Homology

• Gene Tree
  Gm8596
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm8596
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000101004 (Evidence)
• NCBI Gene
  667371

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101004	Ensembl Gene Model | MGI Sequence Detail	792	C57BL/6J
transcript	ENSMUST00000188004	Ensembl | MGI Sequence Detail	792	Not Applicable

References

• Summaries
  All 11

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14