Gm7498 Pseudogene Detail

Summary

• Symbol
  Gm7498
• Name
  predicted gene 7498

• Feature Type
  pseudogene
• IDs
  MGI:3646544
  NCBI Gene: 665114
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:84008594-84009494 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 36.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646544	pseudogene	Chr6:84008570-84009653 (+)
129S1/SvImJ	ENSMUSG00200012934	pseudogene	Chr6:80977678-80978761 (+)
A/J	ENSMUSG00195012436	pseudogene	Chr6:80656663-80657746 (+)
AKR/J	ENSMUSG00220002282	pseudogene	Chr6:79606315-79607398 (+)
BALB/cJ	ENSMUSG00180009967	pseudogene	Chr6:81032731-81033814 (+)
C3H/HeJ	ENSMUSG00175039994	pseudogene	Chr6:96378104-96379187 (-)
C57BL/6NJ	ENSMUSG00215018302	pseudogene	Chr6:81028372-81029455 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008393	pseudogene	Chr6:81030281-81031364 (+)
CBA/J	ENSMUSG00210011546	pseudogene	Chr6:80846576-80847659 (+)
DBA/2J	ENSMUSG00185046839	pseudogene	Chr6:81393715-81394798 (+)
FVB/NJ	ENSMUSG00205027608	pseudogene	Chr6:80074308-80075391 (+)
JF1/MsJ	ENSUMUG00000004239	pseudogene	Chr4:84341424-84342524 (+)
JF1/MsJ	ENSUMUG00000051212	pseudogene	Chr6:91381300-91382400 (-)
JF1/MsJ	ENSUMUG00000055519	pseudogene	Chr7:3314467-3315567 (+)
JF1/MsJ	ENSUMUG00000024001	pseudogene	Chr6:80445914-80447013 (+)
JF1/MsJ	ENSUMUG00000028592	pseudogene	Chr16:61390157-61391258 (+)
JF1/MsJ	ENSUMUG00000016658	pseudogene	Chr6:46286533-46287633 (+)
LP/J	ENSMUSG00230050762	pseudogene	Chr6:82534893-82535976 (+)
NOD/ShiLtJ	ENSMUSG00190001825	pseudogene	Chr6:80477376-80478459 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010006517	pseudogene	Chr6:79792391-79793483 (+)
SPRET/EiJ	ENSMSPG00010044972	pseudogene	Chr6:81927916-81928972 (+)
WSB/EiJ	ENSIUOG00005019480	pseudogene	Chr6:81411807-81412890 (+)

Homology

• Gene Tree
  Gm7498
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm7498
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000108142 (Evidence)
• NCBI Gene
  665114

Representative Sequences			Length	Strain/Species
genomic	665114	NCBI Gene Model | MGI Sequence Detail	901	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48