Gm5358 Pseudogene Detail

Summary

• Symbol
  Gm5358
• Name
  predicted gene 5358

• Feature Type
  pseudogene
• IDs
  MGI:3646543
  NCBI Gene: 384873
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:127767098-127767450 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 74.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646543	pseudogene	Chr8:127766924-127767515 (-)
129S1/SvImJ	ENSMUSG00200004997	pseudogene	Chr8:122025930-122026282 (-)
A/J	ENSMUSG00195003803	pseudogene	Chr8:122297719-122298071 (-)
AKR/J	ENSMUSG00220001798	pseudogene	Chr8:122485588-122485940 (-)
BALB/cJ	ENSMUSG00180000916	pseudogene	Chr8:122342451-122342803 (-)
C3H/HeJ	ENSMUSG00175005213	pseudogene	Chr8:122419121-122419473 (-)
C57BL/6NJ	ENSMUSG00215000714	pseudogene	Chr8:122000245-122000597 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007583	pseudogene	Chr8:121764509-121764861 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205040363	pseudogene	Chr8:121299491-121299843 (-)
JF1/MsJ	ENSUMUG00000041177	pseudogene	Chr8:130841590-130841942 (-)
LP/J	ENSMUSG00230007617	pseudogene	Chr8:132208410-132208762 (-)
NOD/ShiLtJ	ENSMUSG00190006923	pseudogene	Chr8:122442924-122443276 (-)
NZO/HlLtJ	ENSMUSG00225020215	pseudogene	Chr8:135563417-135563769 (-)
PWK/PhJ	ENSLUMG00010002721	pseudogene	Chr8:122140682-122141034 (-)
SPRET/EiJ	ENSMSPG00010001806	pseudogene	Chr8:124337714-124338066 (-)
WSB/EiJ	ENSIUOG00005003192	pseudogene	Chr8:123109454-123109806 (-)

Homology

• Gene Tree
  Gm5358
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000110492 (Evidence)
• NCBI Gene
  384873

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110492	Ensembl Gene Model | MGI Sequence Detail	353	C57BL/6J
transcript	ENSMUST00000212814	Ensembl | MGI Sequence Detail	353	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;