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Gm5974 Pseudogene Detail
Summary
  • Symbol
    Gm5974
  • Name
    predicted gene 5974
Location &
Maps
more
  • Sequence Map
    Chr1:48353025-48354010 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 25.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646540
 pseudogene Chr1:48352826-48354028 (-)
129S1/SvImJ ENSMUSG00200002207
 pseudogene Chr1:45833003-45833988 (-)
A/J ENSMUSG00195002073
 pseudogene Chr1:45738927-45739912 (-)
AKR/J ENSMUSG00220003698
 pseudogene Chr1:45522200-45523185 (-)
BALB/cJ ENSMUSG00180003284
 pseudogene Chr1:45670816-45671801 (-)
C3H/HeJ ENSMUSG00175000140
 pseudogene Chr1:45768733-45769718 (-)
C57BL/6NJ ENSMUSG00215003109
 pseudogene Chr1:45677495-45678480 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009113
 pseudogene Chr1:45427493-45428920 (+)
CAST/EiJ ENSTCUG00005001000
 pseudogene Chr1:45581582-45582567 (-)
CBA/J ENSMUSG00210029985
 pseudogene Chr1:45465227-45466212 (-)
DBA/2J ENSMUSG00185030834
 pseudogene Chr1:46592050-46593035 (-)
FVB/NJ ENSMUSG00205004436
 pseudogene Chr1:45422320-45423305 (-)
JF1/MsJ ENSUMUG00000002812
 pseudogene Chr1:45534986-45535971 (-)
LP/J ENSMUSG00230001587
 pseudogene Chr1:46574334-46575319 (-)
NOD/ShiLtJ ENSMUSG00190002704
 pseudogene Chr1:45605994-45606979 (-)
NZO/HlLtJ ENSMUSG00225001174
 pseudogene Chr1:49773859-49774844 (-)
PWK/PhJ ENSLUMG00010002778
 pseudogene Chr1:45088464-45089449 (-)
SPRET/EiJ ENSMSPG00010013407
 pseudogene Chr1:46765827-46766813 (-)
WSB/EiJ ENSIUOG00005003618
 pseudogene Chr1:45283226-45284211 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5974
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096973 Ensembl Gene Model | MGI Sequence Detail 986 C57BL/6J ±  kb
transcript ENSMUST00000181607 Ensembl | MGI Sequence Detail 986 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory