Gm6788 Pseudogene Detail

Summary

• Symbol
  Gm6788
• Name
  predicted gene 6788

• Feature Type
  pseudogene
• IDs
  MGI:3646480
  NCBI Gene: 627788
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:28740561-28740830 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 23.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646480	pseudogene	Chr19:28740265-28740939 (-)
129S1/SvImJ	ENSMUSG00200021172	pseudogene	Chr19:25452275-25452544 (-)
A/J	ENSMUSG00195037524	pseudogene	Chr19:25625875-25626144 (-)
AKR/J	ENSMUSG00220019575	pseudogene	Chr19:25685814-25686083 (-)
BALB/cJ	ENSMUSG00180014002	pseudogene	Chr19:25954660-25954929 (-)
C3H/HeJ	ENSMUSG00175026651	pseudogene	Chr19:25330868-25331137 (-)
C57BL/6NJ	ENSMUSG00215029577	pseudogene	Chr19:25371278-25371547 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012406	pseudogene	Chr9:66619993-66620249 (-)
CAST/EiJ	ENSTCUG00005018539	pseudogene	Chr19:25199717-25199986 (-)
CBA/J	ENSMUSG00210015001	pseudogene	Chr19:25561832-25562101 (-)
DBA/2J	ENSMUSG00185026051	pseudogene	Chr19:25948585-25948854 (-)
FVB/NJ	ENSMUSG00205013557	pseudogene	Chr19:25342380-25342649 (-)
JF1/MsJ	ENSUMUG00000037761	pseudogene	Chr19:26156864-26157133 (-)
LP/J	ENSMUSG00230029309	pseudogene	Chr19:26761606-26761875 (-)
NOD/ShiLtJ	ENSMUSG00190022154	pseudogene	Chr19:25325339-25325608 (-)
NZO/HlLtJ	ENSMUSG00225029475	pseudogene	Chr19:30518105-30518374 (-)
PWK/PhJ	ENSLUMG00010034490	pseudogene	Chr19:25533234-25533503 (-)
SPRET/EiJ	ENSMSPG00010037693	pseudogene	Chr19:25497786-25498038 (-)
WSB/EiJ	ENSIUOG00005028162	pseudogene	Chr19:25061691-25061960 (-)

Homology

• Gene Tree
  Gm6788
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  APF
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1
• CCDS
  CCDS50412.1

• Ensembl
  ENSMUSG00000090737 (Evidence)
• NCBI Gene
  627788

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090737	Ensembl Gene Model | MGI Sequence Detail	270	C57BL/6J
transcript	ENSMUST00000166459	Ensembl | MGI Sequence Detail	270	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6788:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158734	Chr19:28740937-28740940 (-)	-109 bp