Gm8798 Pseudogene Detail

Summary

• Symbol
  Gm8798
• Name
  predicted gene 8798

• Feature Type
  pseudogene
• IDs
  MGI:3646429
  NCBI Gene: 667760
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:105613494-105627679 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 53.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  261 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646429	pseudogene	Chr8:105613430-105627707 (+)
129S1/SvImJ	ENSMUSG00200015351	pseudogene	Chr8:99892921-99908846 (+)
A/J	ENSMUSG00195004227	pseudogene	Chr8:100195972-100231271 (+)
AKR/J	ENSMUSG00220012041	pseudogene	Chr8:100349191-100365117 (+)
BALB/cJ	ENSMUSG00180004285	pseudogene	Chr8:100221137-100237062 (+)
C3H/HeJ	ENSMUSG00175002953	pseudogene	Chr8:100277908-100293833 (+)
C57BL/6NJ	ENSMUSG00215001364	pseudogene	Chr8:99892229-99908154 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024070	pseudogene	Chr8:99636963-99652897 (+)
CBA/J	ENSMUSG00210015635	pseudogene	Chr8:100205626-100221551 (+)
DBA/2J	ENSMUSG00185005834	pseudogene	Chr8:106314382-106330307 (+)
FVB/NJ	ENSMUSG00205019591	pseudogene	Chr8:99188258-99205552 (+)
JF1/MsJ	ENSUMUG00000017524	pseudogene	Chr8:108647606-108663527 (+)
LP/J	ENSMUSG00230008774	pseudogene	Chr8:109994921-110010846 (+)
NOD/ShiLtJ	ENSMUSG00190013573	pseudogene	Chr8:100344565-100360490 (+)
NZO/HlLtJ	ENSMUSG00225023241	pseudogene	Chr8:113345431-113361356 (+)
PWK/PhJ	ENSLUMG00010004280	pseudogene	Chr8:100118541-100134483 (+)
SPRET/EiJ	ENSMSPG00010041747	pseudogene	Chr8:102208967-102218664 (+)
WSB/EiJ	ENSIUOG00005006411	pseudogene	Chr8:101024728-101040656 (+)

Homology

• Gene Tree
  Gm8798
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110597 (Evidence)
• NCBI Gene
  667760

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110597	Ensembl Gene Model | MGI Sequence Detail	14186	C57BL/6J
transcript	ENSMUST00000211877	Ensembl | MGI Sequence Detail	1661	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;