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Gm5616 Pseudogene Detail
Summary
  • Symbol
    Gm5616
  • Name
    predicted gene 5616
Location &
Maps
more
  • Sequence Map
    Chr9:48361700-48362083 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 26.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646416
 pseudogene Chr9:48361591-48362846 (+)
129S1/SvImJ ENSMUSG00200018741
 pseudogene Chr9:45530730-45531113 (+)
A/J ENSMUSG00195024051
 pseudogene Chr9:45215694-45216077 (+)
AKR/J ENSMUSG00220043312
 pseudogene Chr9:45303276-45303659 (+)
BALB/cJ ENSMUSG00180033859
 pseudogene Chr9:45327135-45327518 (+)
C3H/HeJ ENSMUSG00175016303
 pseudogene Chr9:45339308-45339691 (+)
C57BL/6NJ ENSMUSG00215037150
 pseudogene Chr9:45284985-45285368 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023195
 protein coding gene Chr2:11287665-11290801 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210016834
 pseudogene Chr9:45412243-45412626 (+)
DBA/2J ENSMUSG00185017519
 pseudogene Chr4:144352954-144353337 (-)
DBA/2J ENSMUSG00185012466
 pseudogene Chr9:45453563-45453946 (+)
FVB/NJ ENSMUSG00205042930
 pseudogene Chr9:45691752-45692135 (+)
JF1/MsJ ENSUMUG00000042671
 pseudogene Chr9:45502738-45503121 (+)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190026237
 pseudogene Chr9:45542999-45543382 (+)
NOD/ShiLtJ ENSMUSG00190039812
 pseudogene Chr4:140467277-140467660 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010048675
 pseudogene Chr4:139651462-139651845 (-)
PWK/PhJ ENSLUMG00010022163
 pseudogene Chr9:45470559-45470942 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063543 Ensembl Gene Model | MGI Sequence Detail 384 C57BL/6J ±  kb
transcript ENSMUST00000165252 Ensembl | MGI Sequence Detail 384 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory