Gm8709 Pseudogene Detail

Summary

• Symbol
  Gm8709
• Name
  predicted gene 8709

• Feature Type
  pseudogene
• IDs
  MGI:3646360
  NCBI Gene: 667572
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:26549597-26550608 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 14.12 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646360	pseudogene	Chr10:26549442-26550647 (-)
129S1/SvImJ	ENSMUSG00200010482	pseudogene	Chr10:23368714-23369725 (-)
A/J	ENSMUSG00195015759	pseudogene	Chr10:23671083-23672094 (-)
AKR/J	ENSMUSG00220011955	pseudogene	Chr10:23351446-23352457 (-)
BALB/cJ	ENSMUSG00180020085	pseudogene	Chr10:23799883-23800894 (-)
C3H/HeJ	ENSMUSG00175026628	pseudogene	Chr10:23468052-23469063 (-)
C57BL/6NJ	ENSMUSG00215016127	pseudogene	Chr10:23341286-23342297 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009410	pseudogene	Chr10:22626978-22627984 (-)
CAST/EiJ	ENSTCUG00005014883	pseudogene	Chr10:23142934-23143939 (-)
CBA/J	ENSMUSG00210023642	pseudogene	Chr10:23455982-23456993 (-)
DBA/2J	ENSMUSG00185007622	pseudogene	Chr10:23628063-23629074 (-)
FVB/NJ	ENSMUSG00205010703	pseudogene	Chr10:23606558-23607569 (-)
JF1/MsJ	ENSUMUG00000019534	pseudogene	Chr10:23400116-23401121 (-)
LP/J	ENSMUSG00230011873	pseudogene	Chr10:25403161-25404172 (-)
NOD/ShiLtJ	ENSMUSG00190015599	pseudogene	Chr10:23758376-23759387 (-)
NZO/HlLtJ	ENSMUSG00225031116	pseudogene	Chr10:29662029-29663040 (-)
PWK/PhJ	ENSLUMG00010010822	pseudogene	Chr10:23298094-23299099 (-)
SPRET/EiJ	ENSMSPG00010015782	pseudogene	Chr10:24074956-24075964 (-)
WSB/EiJ	ENSIUOG00005031589	pseudogene	Chr10:23037702-23038713 (-)

Homology

• Gene Tree
  Gm8709
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8709
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000098179 (Evidence)
• NCBI Gene
  667572

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098179	Ensembl Gene Model | MGI Sequence Detail	1012	C57BL/6J
transcript	ENSMUST00000183230	Ensembl | MGI Sequence Detail	1012	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87