Gm5475 Gene Detail

Summary

• Symbol
  Gm5475
• Name
  predicted gene 5475

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3646320
  NCBI Gene: 432982
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:100321074-100326031 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 56.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646320	protein coding gene	Chr15:100320028-100326031 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195036721	protein coding gene	Chr15:97403386-97409390 (+)
AKR/J	ENSMUSG00220043944	protein coding gene	Chr15:97396618-97402622 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175040588	protein coding gene	Chr15:97583372-97589376 (+)
C57BL/6NJ	ENSMUSG00215049779	protein coding gene	Chr15:97358456-97364460 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020290	protein coding gene	Chr15:94119890-94126284 (+)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185039349	protein coding gene	Chr15:97402972-97408976 (+)
FVB/NJ	ENSMUSG00205023481	protein coding gene	Chr15:97107480-97113485 (+)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm5475
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  21 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm5475
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000087444 (Evidence)
• NCBI Gene
  432982

Representative Sequences			Length	Strain/Species
genomic	432982	NCBI Gene Model | MGI Sequence Detail	4958	C57BL/6J
transcript	NR_040351	RefSeq | MGI Sequence Detail	2320	C57BL/6
polypeptide	Q3TR11	UniProt | EBI | MGI Sequence Detail	103	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 5

  cDNA 5

  
  

  Microarray probesets 1

References

• Summaries
  All 30

  Diseases 1

  Phenotypes 21
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm5475:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr133124	Chr15:100319463-100319471 (+)	-1,607 bp
Tssr133125	Chr15:100319552-100319564 (+)	-1,516 bp