Rps12-ps2 Pseudogene Detail

Summary

• Symbol
  Rps12-ps2
• Name
  ribosomal protein S12, pseudogene 2
• Synonyms
  Gm5462

• Feature Type
  pseudogene
• IDs
  MGI:3646224
  NCBI Gene: 432865
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:61704417-61704815 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 32.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646224	pseudogene	Chr14:61704393-61704845 (-)
129S1/SvImJ	ENSMUSG00200043372	pseudogene	Chr14:50296690-50297088 (-)
129S1/SvImJ	ENSMUSG00200044699	pseudogene	Chr9:62759265-62759663 (-)
A/J	ENSMUSG00195034581	pseudogene	Chr14:50479686-50480084 (-)
AKR/J	ENSMUSG00220033851	pseudogene	Chr14:49826949-49827347 (-)
BALB/cJ	ENSMUSG00180052707	pseudogene	Chr14:50101569-50101967 (-)
C3H/HeJ	ENSMUSG00175039867	pseudogene	Chr14:51832558-51832956 (-)
C57BL/6NJ	ENSMUSG00215050632	pseudogene	Chr14:50031288-50031686 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038966	pseudogene	Chr14:51748933-51749331 (-)
CBA/J	ENSMUSG00210049030	pseudogene	Chr14:50467678-50468076 (-)
DBA/2J	ENSMUSG00185034096	pseudogene	Chr14:55630280-55630678 (-)
DBA/2J	ENSMUSG00185036655	pseudogene	Chr9:62721213-62721611 (-)
FVB/NJ	ENSMUSG00205046045	pseudogene	Chr14:49962412-49962810 (-)
JF1/MsJ	ENSUMUG00000049692	pseudogene	Chr14:66819091-66819489 (-)
LP/J	ENSMUSG00230036852	pseudogene	Chr14:67659904-67660302 (-)
LP/J	ENSMUSG00230028585	pseudogene	Chr9:62958242-62958640 (-)
NOD/ShiLtJ	ENSMUSG00190049891	pseudogene	Chr14:50264085-50264483 (-)
NZO/HlLtJ	ENSMUSG00225047115	pseudogene	Chr14:58005660-58006058 (-)
PWK/PhJ	ENSLUMG00010050131	pseudogene	Chr14:49716984-49717382 (-)
SPRET/EiJ	ENSMSPG00010035496	pseudogene	Chr14:53131775-53132173 (-)
SPRET/EiJ	ENSMSPG00010051000	pseudogene	Chr15:99006753-99007151 (+)
WSB/EiJ	ENSIUOG00005047131	pseudogene	Chr14:49699929-49700327 (-)

Homology

• Gene Tree
  Rps12-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rps12-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000115595 (Evidence)
• NCBI Gene
  432865

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115595	Ensembl Gene Model | MGI Sequence Detail	399	C57BL/6J
transcript	ENSMUST00000228851	Ensembl | MGI Sequence Detail	399	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;