Gm5274 Pseudogene Detail

Summary

• Symbol
  Gm5274
• Name
  predicted gene 5274

• Feature Type
  pseudogene
• IDs
  MGI:3646161
  NCBI Gene: 383849
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:47039167-47040169 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 20.79 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  247 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646161	pseudogene	Chr3:47038962-47040185 (-)
129S1/SvImJ	ENSMUSG00200000726	pseudogene	Chr3:43829188-43830190 (-)
A/J	ENSMUSG00195000752	pseudogene	Chr3:43844057-43845059 (-)
AKR/J	ENSMUSG00220016124	pseudogene	Chr3:43871222-43872224 (-)
BALB/cJ	ENSMUSG00180000669	pseudogene	Chr3:43921523-43922525 (-)
C3H/HeJ	ENSMUSG00175002179	pseudogene	Chr3:43751610-43752612 (-)
C57BL/6NJ	ENSMUSG00215000566	pseudogene	Chr3:44166834-44167836 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010836	pseudogene	Chr3:41137186-41138184 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210000638	pseudogene	Chr3:43864962-43865964 (-)
DBA/2J	ENSMUSG00185000330	pseudogene	Chr3:44084015-44085017 (-)
FVB/NJ	ENSMUSG00205009962	pseudogene	Chr3:43072307-43073309 (-)
JF1/MsJ	ENSUMUG00000026760	pseudogene	Chr3:43532948-43533950 (-)
LP/J	ENSMUSG00230000527	pseudogene	Chr3:46035928-46036930 (-)
NOD/ShiLtJ	ENSMUSG00190000703	pseudogene	Chr3:44182479-44183481 (-)
NZO/HlLtJ	ENSMUSG00225000717	pseudogene	Chr3:48657270-48658272 (-)
PWK/PhJ	ENSLUMG00010009968	pseudogene	Chr3:43616821-43617823 (-)
SPRET/EiJ	ENSMSPG00010007121	pseudogene	Chr3:44207946-44208936 (-)
WSB/EiJ	ENSIUOG00005000534	pseudogene	Chr3:44014514-44015516 (-)

Homology

• Gene Tree
  Gm5274
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm5274
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097985 (Evidence)
• NCBI Gene
  383849

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097985	Ensembl Gene Model | MGI Sequence Detail	1003	C57BL/6J
transcript	ENSMUST00000182641	Ensembl | MGI Sequence Detail	1003	Not Applicable

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426