Rpl12-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl12-ps1
• Name
  ribosomal protein L12, pseudogene 1
• Synonyms
  Gm4957

• Feature Type
  pseudogene
• IDs
  MGI:3646154
  NCBI Gene: 241053
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:36997011-36997508 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 15.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646154	pseudogene	Chr1:36996967-36997597 (-)
129S1/SvImJ	ENSMUSG00200005062	pseudogene	Chr1:34586011-34586508 (-)
A/J	ENSMUSG00195043716	pseudogene	Chr1:34206521-34207018 (-)
AKR/J	ENSMUSG00220009535	pseudogene	Chr1:34233118-34233615 (-)
BALB/cJ	ENSMUSG00180012181	pseudogene	Chr1:34331355-34331852 (-)
C3H/HeJ	ENSMUSG00175001456	pseudogene	Chr1:34210625-34211122 (-)
C57BL/6NJ	ENSMUSG00215034896	pseudogene	Chr1:34308306-34308803 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003147	pseudogene	Chr1:34382008-34382505 (-)
CBA/J	ENSMUSG00210006020	pseudogene	Chr1:34058930-34059427 (-)
DBA/2J	ENSMUSG00185011409	pseudogene	Chr1:35144307-35144804 (-)
FVB/NJ	ENSMUSG00205040286	pseudogene	Chr1:34262216-34262713 (-)
JF1/MsJ	ENSUMUG00000025895	pseudogene	Chr1:34345274-34345771 (-)
LP/J	ENSMUSG00230026256	pseudogene	Chr1:35206805-35207302 (-)
NOD/ShiLtJ	ENSMUSG00190038885	pseudogene	Chr1:34241365-34241862 (-)
NZO/HlLtJ	ENSMUSG00225014332	pseudogene	Chr1:38446995-38447492 (-)
PWK/PhJ	ENSLUMG00010036326	pseudogene	Chr1:33883542-33884039 (-)
SPRET/EiJ	ENSMSPG00010029315	pseudogene	Chr1:35359754-35360251 (-)
WSB/EiJ	ENSIUOG00005040528	pseudogene	Chr1:34191837-34192334 (-)

Homology

• Gene Tree
  Rpl12-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rpl12-ps1
• Incidental Mutations
  Mutagenetix
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080054 (Evidence)
• NCBI Gene
  241053

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080054	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000116168	Ensembl | MGI Sequence Detail	498	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Rpl12-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr11291	Chr1:36997598-36997600 (-)	-91 bp