Gm6263 Pseudogene Detail

Summary

• Symbol
  Gm6263
• Name
  predicted gene 6263

• Feature Type
  pseudogene
• IDs
  MGI:3646097
  NCBI Gene: 621824
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:74166912-74168253 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 40.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646097	pseudogene	Chr13:74166714-74168431 (-)
129S1/SvImJ	ENSMUSG00200014306	pseudogene	Chr13:68558267-68559608 (-)
A/J	ENSMUSG00195029950	pseudogene	Chr13:69146344-69147685 (-)
AKR/J	ENSMUSG00220038757	pseudogene	Chr13:67736369-67737710 (-)
BALB/cJ	ENSMUSG00180025880	pseudogene	Chr13:69644698-69646039 (-)
C3H/HeJ	ENSMUSG00175008459	pseudogene	Chr13:69921889-69923230 (-)
C57BL/6NJ	ENSMUSG00215013250	pseudogene	Chr13:69710669-69712010 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009886	pseudogene	Chr13:68667332-68668692 (-)
CAST/EiJ	ENSTCUG00005012132	pseudogene	Chr13:69226865-69228206 (-)
CBA/J	ENSMUSG00210010023	pseudogene	Chr13:69246002-69247343 (-)
DBA/2J	ENSMUSG00185018657	pseudogene	Chr13:72937546-72938887 (-)
FVB/NJ	ENSMUSG00205031596	pseudogene	Chr13:68624912-68626253 (-)
JF1/MsJ	ENSUMUG00000031748	pseudogene	Chr13:72697526-72698867 (-)
LP/J	ENSMUSG00230027353	pseudogene	Chr13:82856293-82857634 (-)
NOD/ShiLtJ	ENSMUSG00190044851	pseudogene	Chr13:69245048-69246389 (-)
NZO/HlLtJ	ENSMUSG00225028222	pseudogene	Chr13:75363486-75364827 (-)
PWK/PhJ	ENSLUMG00010012438	pseudogene	Chr13:68736600-68737941 (-)
SPRET/EiJ	ENSMSPG00010032974	pseudogene	Chr13:69633436-69634778 (-)
WSB/EiJ	ENSIUOG00005025193	pseudogene	Chr13:68498863-68500204 (-)

Homology

• Gene Tree
  Gm6263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6263
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000080966 (Evidence)
• NCBI Gene
  621824

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080966	Ensembl Gene Model | MGI Sequence Detail	1342	C57BL/6J
transcript	ENSMUST00000120029	Ensembl | MGI Sequence Detail	1342	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm6263:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123205	Chr13:74168321-74168325 (-)	-70 bp