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Gm5524 Gene Detail
Summary
  • Symbol
    Gm5524
  • Name
    predicted gene 5524
Location &
Maps
more
  • Sequence Map
    Chr1:27923127-27941268 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 10.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    679 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646041
 lncRNA gene Chr1:27923059-27941916 (+)
129S1/SvImJ ENSMUSG00200000888
 lncRNA gene Chr1:25373457-25392324 (+)
A/J ENSMUSG00195000068
 lncRNA gene Chr1:25118084-25136949 (+)
AKR/J ENSMUSG00220000673
 lncRNA gene Chr1:25183850-25202682 (+)
BALB/cJ ENSMUSG00180001119
 lncRNA gene Chr1:25226030-25244863 (+)
C3H/HeJ ENSMUSG00175000686
 lncRNA gene Chr1:25115816-25134679 (+)
C57BL/6NJ ENSMUSG00215001132
 lncRNA gene Chr1:25207013-25225853 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004335
 lincRNA gene Chr1:23075568-23093536 (+)
CAST/EiJ ENSTCUG00005000473
 lncRNA gene Chr1:25293411-25312256 (+)
CBA/J ENSMUSG00210010698
 lncRNA gene Chr1:24975095-24993950 (+)
DBA/2J ENSMUSG00185016557
 lncRNA gene Chr1:26045027-26063873 (+)
FVB/NJ ENSMUSG00205006927
 lncRNA gene Chr1:25104524-25123387 (+)
JF1/MsJ ENSUMUG00000000317
 lncRNA gene Chr1:25206623-25225461 (+)
LP/J ENSMUSG00230000551
 lncRNA gene Chr1:26046866-26065735 (+)
NOD/ShiLtJ ENSMUSG00190000155
 lncRNA gene Chr1:25119001-25137857 (+)
NZO/HlLtJ ENSMUSG00225000626
 lncRNA gene Chr1:29319441-29338275 (+)
PWK/PhJ ENSLUMG00010000158
 lncRNA gene Chr1:24809682-24828617 (+)
SPRET/EiJ ENSMSPG00010000759
 lncRNA gene Chr1:25941100-25959742 (+)
WSB/EiJ ENSIUOG00005001861
 lncRNA gene Chr1:25113590-25132438 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 433281 NCBI Gene Model | MGI Sequence Detail 18142 C57BL/6J ±  kb
transcript NR_151583 RefSeq | MGI Sequence Detail 1793 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
Other
Accession IDs
less
MGI:2138370
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory