Gm8784 Pseudogene Detail

Summary

• Symbol
  Gm8784
• Name
  predicted gene 8784

• Feature Type
  pseudogene
• IDs
  MGI:3646031
  NCBI Gene: 667727
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:9273573-9275007 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 3.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646031	pseudogene	Chr13:9249522-9275025 (+)
129S1/SvImJ	ENSMUSG00200006978	pseudogene	Chr13:6448750-6450185 (+)
A/J	ENSMUSG00195012878	pseudogene	Chr13:5854914-5856350 (+)
AKR/J	ENSMUSG00220013586	pseudogene	Chr13:6113997-6115433 (+)
BALB/cJ	ENSMUSG00180010608	pseudogene	Chr13:6260463-6261899 (+)
C3H/HeJ	ENSMUSG00175008694	pseudogene	Chr13:6309187-6310621 (+)
C57BL/6NJ	ENSMUSG00215020941	pseudogene	Chr13:6562142-6563578 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024938	pseudogene	Chr13:6476998-6478440 (+)
CBA/J	ENSMUSG00210023254	pseudogene	Chr13:5836705-5838140 (+)
DBA/2J	ENSMUSG00185025867	pseudogene	Chr13:6525499-6526933 (+)
FVB/NJ	ENSMUSG00205023665	pseudogene	Chr13:6276900-6278336 (+)
JF1/MsJ	ENSUMUG00000012566	pseudogene	Chr13:6556665-6558101 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190013550	pseudogene	Chr13:5971101-5972536 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010017720	pseudogene	Chr13:5921563-5922998 (+)
SPRET/EiJ	ENSMSPG00010024779	pseudogene	Chr13:5886173-5887589 (+)
WSB/EiJ	ENSIUOG00005023856	pseudogene	Chr13:5814421-5815859 (+)

Homology

• Gene Tree
  Gm8784
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000113936 (Evidence)
• NCBI Gene
  667727

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113936	Ensembl Gene Model | MGI Sequence Detail	1435	C57BL/6J
transcript	ENSMUST00000222096	Ensembl | MGI Sequence Detail	1435	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22