Gm9372 Pseudogene Detail

Summary

• Symbol
  Gm9372
• Name
  predicted gene 9372

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3645996
  NCBI Gene: 668809
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:124085725-124086154 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 54.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645996	pseudogene	Chr3:124085687-124086154 (+)
129S1/SvImJ	ENSMUSG00200026506	pseudogene	Chr3:120776486-120776915 (+)
A/J	ENSMUSG00195017153	pseudogene	Chr3:120927452-120927881 (+)
AKR/J	ENSMUSG00220026730	pseudogene	Chr3:119388811-119389240 (+)
BALB/cJ	ENSMUSG00180031699	pseudogene	Chr3:120864126-120864555 (+)
C3H/HeJ	ENSMUSG00175028324	pseudogene	Chr3:120410598-120411027 (+)
C57BL/6NJ	ENSMUSG00215007745	pseudogene	Chr3:121229793-121230222 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036868	pseudogene	Chr3:117703420-117703844 (+)
CAST/EiJ	ENSTCUG00005032696	pseudogene	Chr3:121464301-121464730 (+)
CBA/J	ENSMUSG00210003141	pseudogene	Chr3:121041263-121041692 (+)
DBA/2J	ENSMUSG00185026605	pseudogene	Chr3:121665565-121665994 (+)
FVB/NJ	ENSMUSG00205007999	pseudogene	Chr3:120035714-120036143 (+)
JF1/MsJ	ENSUMUG00000003612	pseudogene	Chr3:120408146-120408575 (+)
LP/J	ENSMUSG00230004299	pseudogene	Chr3:123627890-123628319 (+)
NOD/ShiLtJ	ENSMUSG00190033383	pseudogene	Chr3:122056837-122057266 (+)
NZO/HlLtJ	ENSMUSG00225003508	pseudogene	Chr3:126117652-126118081 (+)
PWK/PhJ	ENSLUMG00010009769	pseudogene	Chr3:120440433-120440862 (+)
SPRET/EiJ	ENSMSPG00010031420	pseudogene	Chr3:121237258-121237687 (+)
WSB/EiJ	ENSIUOG00005007460	pseudogene	Chr3:121275252-121275680 (+)

Homology

• Gene Tree
  Gm9372
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9372
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000090474 (Evidence)
• NCBI Gene
  668809

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090474	Ensembl Gene Model | MGI Sequence Detail	430	C57BL/6J
transcript	ENSMUST00000168454	Ensembl | MGI Sequence Detail	430	Not Applicable
polypeptide	XP_036019405	RefSeq | MGI Sequence Detail	155	C57BL/6J

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426