Gm7575 Pseudogene Detail

Summary

• Symbol
  Gm7575
• Name
  predicted gene 7575

• Feature Type
  pseudogene
• IDs
  MGI:3645860
  NCBI Gene: 665296
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:10928884-10931510 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 5.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645860	pseudogene	Chr18:10928608-10931803 (+)
129S1/SvImJ	ENSMUSG00200026288	pseudogene	Chr18:7867474-7869897 (+)
A/J	ENSMUSG00195009531	pseudogene	Chr18:8047828-8050458 (+)
AKR/J	ENSMUSG00220019313	pseudogene	Chr18:8039057-8041683 (+)
BALB/cJ	ENSMUSG00180005500	pseudogene	Chr18:8487945-8490575 (+)
C3H/HeJ	ENSMUSG00175007940	pseudogene	Chr18:8028162-8030790 (+)
C57BL/6NJ	ENSMUSG00215021046	pseudogene	Chr18:7763707-7766331 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017544	pseudogene	Chr18:7851328-7853744 (+)
CBA/J	ENSMUSG00210021972	pseudogene	Chr18:8036205-8038833 (+)
DBA/2J	ENSMUSG00185030744	pseudogene	Chr18:8043850-8046478 (+)
FVB/NJ	ENSMUSG00205035921	pseudogene	Chr18:7823350-7825976 (+)
JF1/MsJ	ENSUMUG00000043705	pseudogene	Chr18:8101220-8103635 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010609	pseudogene	Chr18:7819675-7822301 (+)
NZO/HlLtJ	ENSMUSG00225034186	pseudogene	Chr18:10027252-10029880 (+)
PWK/PhJ	ENSLUMG00010009667	pseudogene	Chr18:8321509-8323926 (+)
SPRET/EiJ	ENSMSPG00010012057	pseudogene	Chr18:7955480-7958165 (+)
WSB/EiJ	ENSIUOG00005027491	pseudogene	Chr18:7897009-7899635 (+)

Homology

• Gene Tree
  Gm7575
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000117563 (Evidence)
• NCBI Gene
  665296

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117563	Ensembl Gene Model | MGI Sequence Detail	2627	C57BL/6J
transcript	ENSMUST00000235119	Ensembl | MGI Sequence Detail	2627	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;