Gm8098 Gene Detail

Summary

• Symbol
  Gm8098
• Name
  predicted gene 8098

• Feature Type
  lncRNA gene
• IDs
  MGI:3645749
  NCBI Gene: 666427
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:30217464-30230491 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 17.67 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  177 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645749	lncRNA gene	Chr11:30217458-30237069 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015163	unclassified non-coding RNA gene	Chr11:28307821-28323827 (+)
A/J	MGP_AJ_G0015137	unclassified non-coding RNA gene	Chr11:27254561-27267589 (+)
AKR/J	MGP_AKRJ_G0015100	unclassified non-coding RNA gene	Chr11:28147048-28160143 (+)
BALB/cJ	MGP_BALBcJ_G0015100	unclassified non-coding RNA gene	Chr11:27485059-27498787 (+)
C3H/HeJ	MGP_C3HHeJ_G0014923	unclassified non-coding RNA gene	Chr11:28060799-28074384 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015556	unclassified non-coding RNA gene	Chr11:29277311-29293326 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013302	unclassified non-coding RNA gene	Chr11:25860233-25874127 (+)
CAST/EiJ	MGP_CASTEiJ_G0014477	unclassified non-coding RNA gene	Chr11:28149332-28164850 (+)
CBA/J	MGP_CBAJ_G0014902	unclassified non-coding RNA gene	Chr11:30631284-30644267 (+)
DBA/2J	MGP_DBA2J_G0014995	unclassified non-coding RNA gene	Chr11:27118818-27132549 (+)
FVB/NJ	MGP_FVBNJ_G0015007	unclassified non-coding RNA gene	Chr11:26918581-26931740 (+)
LP/J	MGP_LPJ_G0015077	unclassified non-coding RNA gene	Chr11:28566713-28581756 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015033	unclassified non-coding RNA gene	Chr11:31725853-31741141 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015595	unclassified non-coding RNA gene	Chr11:28270104-28285930 (+)
PWK/PhJ	MGP_PWKPhJ_G0014269	unclassified non-coding RNA gene	Chr11:27213355-27226967 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014056	unclassified non-coding RNA gene	Chr11:27962057-27975074 (+)
WSB/EiJ	MGP_WSBEiJ_G0014580	unclassified non-coding RNA gene	Chr11:27942890-27957432 (+)

Homology

• Gene Tree
  Gm8098
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm8098
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3
• UniProt
  1

• Ensembl
  ENSMUSG00000073073 (Evidence)
• NCBI Gene
  666427

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000073073	Ensembl Gene Model | MGI Sequence Detail	13028	C57BL/6J
transcript	ENSMUST00000146985	Ensembl | MGI Sequence Detail	1499	Not Applicable
polypeptide	Q3UTJ9	UniProt | EBI | MGI Sequence Detail	93	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14