Gm6590 Pseudogene Detail

Summary

• Symbol
  Gm6590
• Name
  predicted gene 6590

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3645685
  NCBI Gene: 625473
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:130430032-130453991 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 63.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  267 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645685	pseudogene	Chr6:130430032-130454774 (-)
129S1/SvImJ	ENSMUSG00200046785	pseudogene	Chr6:127697981-127712726 (-)
A/J	ENSMUSG00195031964	pseudogene	Chr6:126702656-126726497 (-)
AKR/J	ENSMUSG00220040732	pseudogene	Chr6:125564246-125588082 (-)
BALB/cJ	ENSMUSG00180039521	pseudogene	Chr6:127039527-127063370 (-)
C3H/HeJ	ENSMUSG00175044504	pseudogene	Chr6:126719730-126743571 (-)
C57BL/6NJ	ENSMUSG00215033009	pseudogene	Chr6:127260675-127284628 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043131	pseudogene	Chr6:127245970-127269931 (-)
CBA/J	ENSMUSG00210017013	pseudogene	Chr6:126739485-126763329 (-)
DBA/2J	ENSMUSG00185045748	pseudogene	Chr6:127437980-127461831 (-)
FVB/NJ	ENSMUSG00205040316	pseudogene	Chr6:126711631-126726371 (-)
JF1/MsJ	ENSUMUG00000043539	pseudogene	Chr6:126101777-126125662 (-)
LP/J	ENSMUSG00230045580	pseudogene	Chr6:128636858-128660684 (-)
NOD/ShiLtJ	ENSMUSG00190039271	pseudogene	Chr6:127227121-127251032 (-)
NZO/HlLtJ	ENSMUSG00225018562	pseudogene	Chr6:131155628-131179551 (-)
PWK/PhJ	ENSLUMG00010041743	pseudogene	Chr6:125218857-125242696 (-)
SPRET/EiJ	ENSMSPG00010043269	pseudogene	Chr6:128335773-128357312 (-)
WSB/EiJ	ENSIUOG00005046459	pseudogene	Chr6:127753678-127777602 (-)

Homology

• Gene Tree
  Gm6590
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000107492 (Evidence)
• NCBI Gene
  625473

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107492	Ensembl Gene Model | MGI Sequence Detail	23960	C57BL/6J
transcript	ENSMUST00000203343	Ensembl | MGI Sequence Detail	687	Not Applicable
polypeptide	XP_036008319	RefSeq | MGI Sequence Detail	230	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;