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Gm5849 Gene Detail
Summary
  • Symbol
    Gm5849
  • Name
    predicted gene 5849
Location &
Maps
more
  • Sequence Map
    Chr3:90683126-90685187 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    107 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645655
 protein coding gene Chr3:90683126-90685187 (-)
129S1/SvImJ ENSMUSG00200037668
 protein coding gene Chr3:87547370-87549431 (-)
A/J ENSMUSG00195052822
 protein coding gene Chr3:87554663-87556724 (-)
AKR/J ENSMUSG00220045025
 protein coding gene Chr3:87518147-87520208 (-)
BALB/cJ ENSMUSG00180042100
 protein coding gene Chr3:87666509-87668570 (-)
C3H/HeJ ENSMUSG00175045535
 protein coding gene Chr3:87487338-87489399 (-)
C57BL/6NJ ENSMUSG00215046890
 protein coding gene Chr3:87927194-87929255 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005047517
 protein coding gene Chr3:87012867-87014928 (-)
CBA/J ENSMUSG00210046735
 protein coding gene Chr3:87625004-87627065 (-)
DBA/2J ENSMUSG00185049514
 protein coding gene Chr3:87745748-87747809 (-)
FVB/NJ ENSMUSG00205048364
 protein coding gene Chr3:86548413-86550474 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230035407
 protein coding gene Chr3:89768344-89770405 (-)
NOD/ShiLtJ ENSMUSG00190032557
 protein coding gene Chr3:88027933-88029994 (-)
NZO/HlLtJ ENSMUSG00225008052
 protein coding gene Chr3:92529793-92531854 (-)
PWK/PhJ ENSLUMG00010045212
 protein coding gene Chr3:87402440-87404501 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    S100A9, S100 calcium binding protein A9
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    S100A9, S100 calcium binding protein A9
  • Synonyms
    60B8AG, CAGB, CFAG, CGLB, L1AG, LIAG, MAC387, MIF, MRP14, NIF, P14, S100-A9
  • Links
    NCBI Gene ID: 6280
    UniProt: P06702

  • Chr Location
    1q21.3; chr1:153357767-153361027 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human S100A9 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5849
  • Find Mice (IMSR)
    5 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096621 Ensembl Gene Model | MGI Sequence Detail 2062 C57BL/6J ±  kb
transcript ENSMUST00000180151 Ensembl | MGI Sequence Detail 482 Not Applicable  
polypeptide ENSMUSP00000137232 Ensembl | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002048 EF-hand domain
    IPR011992 EF-hand domain pair
    IPR013787 S100/CaBP-9k-type, calcium binding, subdomain
References
more
  • Summaries
    All 15
    Diseases 1
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory